RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 NDPQ00604 133 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 C9orf66Q5T8R8 295 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 SSX7Q7RTT5 188 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 SBSPONQ8IVN8 264 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 KLHL30-AS1Q8NEE0 82 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 MISP3Q96FF7 219 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
MRPL55-204ENST00000348259 TREM1Q9NP99 234 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 THYN1Q9P016 225 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 ZNF580Q9UK33 172 aa7.47□□□□□ -1.21
MRPL55-204ENST00000348259 CARHSP1Q9Y2V2 147 aaKnown RBP7.47□□□□□ -1.21
MRPL55-204ENST00000348259 A0A1W2PPV4 95 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 LINC01548A6NM66 108 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 K7EIM0 57 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 IFNA1P01562 189 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 STAG3L2P0CL84 134 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 STAG3L3P0CL85 134 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 CDX1P47902 265 aaPredicted RBP7.46□□□□□ -1.22
MRPL55-204ENST00000348259 RND2P52198 227 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 PLP1P60201 277 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 CFHR3Q02985 330 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 LCN15Q6UWW0 184 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 SLC35E3Q7Z769 313 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 MYOZ3Q8TDC0 251 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 ACY3Q96HD9 319 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 ATP6V0BQ99437 205 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 TXN2Q99757 166 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 SLC35B3Q9H1N7 401 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 EDA2RQ9HAV5 297 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
MRPL55-204ENST00000348259 TRAV30A0A087WSZ9 112 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 TRBV9A0A0B4J1U6 114 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 ZFP92A6NM28 416 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 C9JQL5 133 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 CLN5O75503 358 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 CXorf1O96002 111 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 IGF1P05019 195 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 FABP1P07148 127 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 OR5G3P0C626 314 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 BCL2P10415 239 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 ICAM4Q14773 271 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 C19orf54Q5BKX5 351 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 GCSAMLQ5JQS6 135 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 FAM122CQ6P4D5 195 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 CCDC28AQ8IWP9 274 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 OR1L4Q8NGR5 311 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 SUN5Q8TC36 379 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 VN1R17PQ8TDU5 208 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 PFDN5Q99471 154 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 HSPB9Q9BQS6 159 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 TXNDC17Q9BRA2 123 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 FAM103A1Q9BTL3 118 aaKnown RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 MRPL32Q9BYC8 188 aaKnown RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 DNAJC4Q9NNZ3 241 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 MRPL36Q9P0J6 103 aaKnown RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 VAX2Q9UIW0 290 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 LINC00527Q9UJ94 153 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 FUT9Q9Y231 359 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 ZNF256Q9Y2P7 627 aaPredicted RBP7.45□□□□□ -1.22
MRPL55-204ENST00000348259 ARL2-SNX15V9GYD0 113 aa7.45□□□□□ -1.22
MRPL55-204ENST00000348259 F8W036 122 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 RPLP1P05386 114 aaKnown RBP7.44□□□□□ -1.22
MRPL55-204ENST00000348259 IGLC1P0CG04 106 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 APELAP0DMC3 54 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 NPBWR1P48145 328 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 YPEL3P61236 119 aaPredicted RBP7.44□□□□□ -1.22
MRPL55-204ENST00000348259 SLC35B1P78383 322 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 SVBPQ8N300 66 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 RARRES2Q99969 163 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
MRPL55-204ENST00000348259 SMAD5-AS1Q9Y6J3 95 aa7.44□□□□□ -1.22
MRPL55-204ENST00000348259 H3BUA1 57 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 AP4M1O00189 453 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 ATP6V0E1O15342 81 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 SCGB2A1O75556 95 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 SRP19P09132 144 aaKnown RBP7.43□□□□□ -1.22
MRPL55-204ENST00000348259 ADCYAP1P18509 176 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 FGF8P55075 233 aaPredicted RBP7.43□□□□□ -1.22
MRPL55-204ENST00000348259 MFAP4P55083 255 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 TAS2R45P59539 299 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 ZNF90Q03938 601 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 KIAA0141Q14154 515 aaPredicted RBP7.43□□□□□ -1.22
MRPL55-204ENST00000348259 HAGHQ16775 308 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 TEX38Q6PEX7 206 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 UNQ5815/PRO19632Q6UWF5 114 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 PQLC2Q6ZP29 291 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 C19orf35Q6ZS72 473 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 LCNL1Q6ZST4 164 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 NECAP1Q8NC96 275 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 TMEM37Q8WXS4 190 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 TM2D3Q9BRN9 247 aa7.43□□□□□ -1.22
MRPL55-204ENST00000348259 TMEM231Q9H6L2 316 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms