RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 CXorf65A6NEN9 183 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 K7EN84 100 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 TRGC1P0CF51 173 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 RHOGP84095 191 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 PMS2P11Q13670 270 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 RNF125Q96EQ8 232 aa13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 TBL2Q9Y4P3 447 aaKnown RBP13.53□□□□□ -0.24
SMARCC2-202ENST00000347471 AMY1AP04745 511 aa13.52□□□□□ -0.24
SMARCC2-202ENST00000347471 CRYGCP07315 174 aa13.52□□□□□ -0.24
SMARCC2-202ENST00000347471 LCNL1Q6ZST4 164 aa13.52□□□□□ -0.24
SMARCC2-202ENST00000347471 FANCD2OSQ96PS1 177 aa13.52□□□□□ -0.24
SMARCC2-202ENST00000347471 IGHV1-69DA0A0B4J2H0 117 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 ISLRO14498 428 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 IGHV1-69P01742 117 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 GFI1BQ5VTD9 330 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 TEX38Q6PEX7 206 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 CLEC19AQ6UXS0 136 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 HELZ2Q9BYK8 2649 aaKnown RBP13.52□□□□□ -0.25
SMARCC2-202ENST00000347471 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 TXNDC17Q9BRA2 123 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 PSMB11A5LHX3 300 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 RPL15P61313 204 aaKnown RBP13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 NOL4LQ96MY1 436 aaPredicted RBP13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 OOSP1A8MZH6 123 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 IGHV3-11P01762 117 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 CLEC3BP05452 202 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 S100A2P29034 98 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 DUX5Q96PT3 197 aa13.51□□□□□ -0.25
SMARCC2-202ENST00000347471 A0A1W2PRE2 83 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 PEX7O00628 323 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H1BP16401 226 aaKnown RBP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 Q9H3A6 140 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 AP4M1O00189 453 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BKO60814 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 S100A9P06702 114 aaKnown RBP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BJP06899 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 FABP1P07148 127 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BOP23527 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BBP33778 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BDP58876 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BCP62807 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST2H2BEQ16778 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BHQ93079 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BNQ99877 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 HIST1H2BMQ99879 126 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 PFN1P07737 140 aaKnown RBP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 SRSF1Q07955 248 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 IMMP2LQ96T52 175 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
SMARCC2-202ENST00000347471 AVPP01185 164 aa13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 USF2Q15853 346 aaPredicted RBP13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 GOLT1AQ6ZVE7 132 aa13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 IGKV3-7A0A075B6H7 116 aa13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 M0R3E3 92 aa13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
SMARCC2-202ENST00000347471 HECTD1Q9ULT8 2610 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 FOLR2P14207 255 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 ZNF329Q86UD4 541 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 C12orf57Q99622 126 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 CBLN1P23435 193 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 STXBP6Q8NFX7 210 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 B4DSR2 109 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 PPP1R2P9O14990 202 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 BLCAPP62952 87 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 PAX8Q06710 450 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 BPIFA4PQ86YQ2 179 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 GPR61Q9BZJ8 451 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 TRAPPC1Q9Y5R8 145 aa13.48□□□□□ -0.25
SMARCC2-202ENST00000347471 FBN2P35556 2912 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 IGLV11-55A0A075B6I3 123 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 FRMD6-AS1P0C7T7 363 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 IER3P46695 156 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 YPEL4Q96NS1 127 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 ZNF491Q8N8L2 437 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 OR1L6Q8NGR2 347 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 SPOCK3Q9BQ16 436 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 PF4V1P10720 104 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 TPPP3Q9BW30 176 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 KLF2Q9Y5W3 355 aaPredicted RBP13.47□□□□□ -0.25
SMARCC2-202ENST00000347471 TMEM95Q3KNT9 176 aa13.46□□□□□ -0.25
SMARCC2-202ENST00000347471 EPDR1Q9UM22 224 aa13.46□□□□□ -0.25
SMARCC2-202ENST00000347471 NDUFS8O00217 210 aa13.46□□□□□ -0.25
SMARCC2-202ENST00000347471 Q8N6K4 173 aa13.46□□□□□ -0.25
SMARCC2-202ENST00000347471 ZNF586Q9NXT0 402 aa13.46□□□□□ -0.25
SMARCC2-202ENST00000347471 SMAD7O15105 426 aaKnown RBP13.46□□□□□ -0.26
SMARCC2-202ENST00000347471 ZNF98A6NK75 572 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 TRGV3P03979 118 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 EGR2P11161 476 aaPredicted RBP13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 FABP4P15090 132 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 KIAA1644Q3SXP7 199 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms