RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 PCNX1Q96RV3 2341 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 PKDREJQ9NTG1 2253 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 HCP5Q6MZN7 132 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 ZNF833PQ6ZTB9 187 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 C22orf34Q6ZV56 151 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 SELENOKQ9Y6D0 94 aa14.28□□□□□ -0.12
VHL-202ENST00000345392 FAM87AP0C7U9 286 aa14.27□□□□□ -0.12
VHL-202ENST00000345392 TNFAIP6P98066 277 aaPredicted RBP14.27□□□□□ -0.12
VHL-202ENST00000345392 PSG9Q00887 426 aa14.27□□□□□ -0.12
VHL-202ENST00000345392 C12orf54Q6X4T0 127 aa14.27□□□□□ -0.12
VHL-202ENST00000345392 GSX1Q9H4S2 264 aaPredicted RBP14.27□□□□□ -0.12
VHL-202ENST00000345392 C19orf71A6NCJ1 209 aa14.27□□□□□ -0.13
VHL-202ENST00000345392 RBPMS2Q6ZRY4 209 aaKnown RBP14.27□□□□□ -0.13
VHL-202ENST00000345392 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.13
VHL-202ENST00000345392 TPSG1Q9NRR2 321 aa14.27□□□□□ -0.13
VHL-202ENST00000345392 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
VHL-202ENST00000345392 TRAV8-6A0A0B4J262 113 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 ZNF788Q6ZQV5 615 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 PIEZO2Q9H5I5 2752 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 TRAV17A0A0B4J275 112 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 LTAP01374 205 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 PPBPP02775 128 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 LIPFP07098 398 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 ZNF474Q6S9Z5 364 aaPredicted RBP14.26□□□□□ -0.13
VHL-202ENST00000345392 PERPQ96FX8 193 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 ASCL2Q99929 193 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 BSNQ9UPA5 3926 aa14.26□□□□□ -0.13
VHL-202ENST00000345392 GLRXP35754 106 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 THAP8Q8NA92 274 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 RITA1Q96K30 269 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 Q9H3A6 140 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 IGHV1-46P01743 117 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 TCRAP04437 139 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 S100A7P31151 101 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 SUB1P53999 127 aaKnown RBP eCLIP14.25□□□□□ -0.13
VHL-202ENST00000345392 ZCCHC24Q8N2G6 241 aaKnown RBP14.25□□□□□ -0.13
VHL-202ENST00000345392 OR5AN1Q8NGI8 311 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 LINC00574Q9H8X3 128 aa14.25□□□□□ -0.13
VHL-202ENST00000345392 hADV38S2A0JD32 116 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 SLC25A17O43808 307 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 COL8A1P27658 744 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 TMEM167AQ8TBQ9 72 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 NDFIP1Q9BT67 221 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 TACC2O95359 2948 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 A0A1W2PPI3 338 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 TM4SF5O14894 197 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 FTH1P19P0C7X4 201 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 PIP4P1Q86T03 277 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 C5orf17Q8NAS9 161 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 OR4C13Q8NGP0 309 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 H1FXQ92522 213 aaKnown RBP14.24□□□□□ -0.13
VHL-202ENST00000345392 FMC1Q96HJ9 113 aa14.24□□□□□ -0.13
VHL-202ENST00000345392 GAGE12BA1L429 117 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 HTR1DP28221 377 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 STXBP6Q8NFX7 210 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.23□□□□□ -0.13
VHL-202ENST00000345392 OR5AL1P0C617 328 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 GPR183P32249 361 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 GATA4P43694 442 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 ARF6P62330 175 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 CCL8P80075 99 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 CT83Q5H943 113 aa14.23□□□□□ -0.13
VHL-202ENST00000345392 CD5LO43866 347 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 NCR2O95944 276 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 HLA-DRB1P01911 266 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 TCTAP57738 103 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
VHL-202ENST00000345392 PRNTQ86SH4 94 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 OR10X1Q8NGY0 326 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 NEU4Q8WWR8 484 aaPredicted RBP14.22□□□□□ -0.13
VHL-202ENST00000345392 SMIM12Q96EX1 92 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 SOX21Q9Y651 276 aaPredicted RBP14.22□□□□□ -0.13
VHL-202ENST00000345392 PIEZO1Q92508 2521 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 IGLV3-9A0A075B6K5 115 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 KLK10O43240 276 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 GP9P14770 177 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 LINC00312Q9Y6C7 94 aa14.22□□□□□ -0.13
VHL-202ENST00000345392 IGHV3-72A0A0B4J1Y9 119 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 PPIAL4DF5H284 164 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 INS-IGF2F8WCM5 200 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 IGLV2-23P01705 113 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 EXOC3-AS1Q8N2X6 119 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 ZNF492Q9P255 531 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 HSPB8Q9UJY1 196 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 CSMD1Q96PZ7 3565 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 APOHP02749 345 aaPredicted RBP14.21□□□□□ -0.13
VHL-202ENST00000345392 FAM27E3Q08E93 113 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 C2orf91Q6ZV80 131 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 GFRA4Q9GZZ7 299 aa14.21□□□□□ -0.13
VHL-202ENST00000345392 UQCRFS1P47985 274 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 GOLT1AQ6ZVE7 132 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 VSTM2AQ8TAG5 236 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 MS4A6AQ9H2W1 248 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 C7orf71A4D174 169 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 FCN3O75636 299 aa14.2□□□□□ -0.14
VHL-202ENST00000345392 ARMS2P0C7Q2 107 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms