RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 BMPR1BO00238 502 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 KIR3DL3Q8N743 410 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 NUP35Q8NFH5 326 aa11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 SLC25A39Q9BZJ4 359 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 POLR3KQ9Y2Y1 108 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-202ENST00000343765 TRAV8-1A0A0A6YYK1 113 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 APCSP02743 223 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 CDKN1AP38936 164 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 NHLH1Q02575 133 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 SLAQ13239 276 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 K7EIM0 57 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 NDUFS7O75251 213 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 ZNF253O75346 499 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 IGKV1-17P01599 117 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 PMCHP20382 165 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 CAMPP49913 170 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 GRAMD2BQ96HH9 432 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 NEU1Q99519 415 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 FLNCQ14315 2725 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 PKD1L2Q7Z442 2459 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
VIPAS39-202ENST00000343765 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 HLA-DQA1P01909 254 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 Q0VG73 95 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 LY6DQ14210 128 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 LINC00322Q6ZN03 302 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 CFHR4Q92496 578 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 MBD6Q96DN6 1003 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 A6NNC1 897 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 FAM231DQ6ZW35 169 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 TCF24Q7RTU0 167 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 NOL4LQ96MY1 436 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 GPR82Q96P67 336 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 SSBP4Q9BWG4 385 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 ZNF586Q9NXT0 402 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 TCRAP04437 139 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 CEACAM3P40198 252 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 ASCL2Q99929 193 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 RNF5Q99942 180 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 C7orf69Q9H7B7 122 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
VIPAS39-202ENST00000343765 PIEZO1Q92508 2521 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 PAX1P15863 534 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 BRS3P32247 399 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 GPR6P46095 362 aaPredicted RBP11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 PLP1P60201 277 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 DYNAPQ8N1N2 210 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 AMTP48728 403 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 KRTDAPP60985 99 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 TDRG1Q3Y452 100 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 C17orf77Q96MU5 243 aa11.78□□□□□ -0.52
VIPAS39-202ENST00000343765 ESDP10768 282 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 GOLT1AQ6ZVE7 132 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 VMO1Q7Z5L0 202 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 VN1R17PQ8TDU5 208 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 TBL2Q9Y4P3 447 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 ZFYVE26Q68DK2 2539 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 VWC2LB2RUY7 222 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 IL4P05112 153 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 PRTN3P24158 256 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 COX19Q49B96 90 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 TSKUQ8WUA8 353 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 NDUFAF3Q9BU61 184 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.53
VIPAS39-202ENST00000343765 A0A1B0GV90 55 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 ODF3BA8MYP8 253 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 M0R1W7 72 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 ZFP36P26651 326 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 PAX2Q02962 417 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 PRNTQ86SH4 94 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 FMC1Q96HJ9 113 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 FBXL7Q9UJT9 491 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 A0A1W2PS18 150 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 TOMM40O96008 361 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 NDPQ00604 133 aa11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 CIARTQ8N365 385 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-202ENST00000343765 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms