RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 THAP8Q8NA92 274 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 C11orf45Q8TAV5 145 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 PHLDA1Q8WV24 401 aaPredicted RBP14.7□□□□□ -0.06
SYNE2-201ENST00000341472 C11orf68Q9H3H3 251 aaKnown RBP14.7□□□□□ -0.06
SYNE2-201ENST00000341472 ALG5Q9Y673 324 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 ALMS1Q8TCU4 4167 aa14.69□□□□□ -0.06
SYNE2-201ENST00000341472 ADAP1O75689 374 aa14.69□□□□□ -0.06
SYNE2-201ENST00000341472 C1orf194Q5T5A4 169 aa14.69□□□□□ -0.06
SYNE2-201ENST00000341472 PPP1R14BQ96C90 147 aa14.69□□□□□ -0.06
SYNE2-201ENST00000341472 MFFQ9GZY8 342 aa14.69□□□□□ -0.06
SYNE2-201ENST00000341472 STRAPQ9Y3F4 350 aaKnown RBP14.69□□□□□ -0.06
SYNE2-201ENST00000341472 DEFB4AO15263 64 aa14.68□□□□□ -0.06
SYNE2-201ENST00000341472 SSNA1O43805 119 aa14.68□□□□□ -0.06
SYNE2-201ENST00000341472 CFDP00746 253 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-201ENST00000341472 NANOS2P60321 138 aaKnown RBP14.68□□□□□ -0.06
SYNE2-201ENST00000341472 FBXL17Q9UF56 701 aa14.68□□□□□ -0.06
SYNE2-201ENST00000341472 IGKV1OR2-108A0A075B7D4 117 aa14.67□□□□□ -0.06
SYNE2-201ENST00000341472 LY6G6CO95867 125 aa14.67□□□□□ -0.06
SYNE2-201ENST00000341472 POLR2GP62487 172 aaKnown RBP eCLIP14.67□□□□□ -0.06
SYNE2-201ENST00000341472 LINC00476Q8WZB0 136 aa14.67□□□□□ -0.06
SYNE2-201ENST00000341472 PRSS46E5RG02 174 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 H3BMM0 161 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 H3BP45 60 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 C4BPBP20851 252 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 ID1P41134 155 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 NKX2-1P43699 371 aaPredicted RBP14.66□□□□□ -0.06
SYNE2-201ENST00000341472 NUTF2P61970 127 aaKnown RBP14.66□□□□□ -0.06
SYNE2-201ENST00000341472 OR8I2Q8N0Y5 310 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 LINC00052Q96N35 136 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 MED28Q9H204 178 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 HYDINQ4G0P3 5121 aa14.66□□□□□ -0.06
SYNE2-201ENST00000341472 CLEC5AQ9NY25 188 aa14.65□□□□□ -0.06
SYNE2-201ENST00000341472 PSENENQ9NZ42 101 aa14.65□□□□□ -0.06
SYNE2-201ENST00000341472 MIFP14174 115 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 Q8NAQ8 132 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 CSNK1G2-AS1Q8NCQ2 148 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 BPIFCQ8NFQ6 507 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 OR4D5Q8NGN0 318 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 SMIM8Q96KF7 97 aa14.64□□□□□ -0.07
SYNE2-201ENST00000341472 IGHV4-28A0A0C4DH34 117 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 ZNF705EA8MWA4 302 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-201ENST00000341472 RBMY1A1P0DJD3 496 aaKnown RBP14.63□□□□□ -0.07
SYNE2-201ENST00000341472 RBMY1CP0DJD4 496 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 RRAS2P62070 204 aaPredicted RBP14.63□□□□□ -0.07
SYNE2-201ENST00000341472 AKR1C1Q04828 323 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 RBMY1FQ15415 496 aaKnown RBP14.63□□□□□ -0.07
SYNE2-201ENST00000341472 TMEM144Q7Z5S9 345 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 C1QTNF4Q9BXJ3 329 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 SLC45A2Q9UMX9 530 aa14.63□□□□□ -0.07
SYNE2-201ENST00000341472 SSSCA1O60232 199 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 HLA-DRB4P13762 266 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 ORM2P19652 201 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 GATA2P23769 480 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-201ENST00000341472 S100A7P31151 101 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 PSMB3P49720 205 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 IAH1Q2TAA2 248 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-201ENST00000341472 GSG1LQ6UXU4 331 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 TMEM182Q6ZP80 229 aaPredicted RBP14.62□□□□□ -0.07
SYNE2-201ENST00000341472 ACOT7LQ6ZUV0 252 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 GSKIPQ9P0R6 139 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 XCL2Q9UBD3 114 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 HLA-DRB4X5D2U9 266 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 X6R8D5 127 aa14.62□□□□□ -0.07
SYNE2-201ENST00000341472 SMCO3A2RU48 225 aa14.61□□□□□ -0.07
SYNE2-201ENST00000341472 GALR1P47211 349 aa14.61□□□□□ -0.07
SYNE2-201ENST00000341472 SAMD13Q5VXD3 122 aa14.61□□□□□ -0.07
SYNE2-201ENST00000341472 TMEM147Q9BVK8 224 aa14.61□□□□□ -0.07
SYNE2-201ENST00000341472 HRH4Q9H3N8 390 aa14.61□□□□□ -0.07
SYNE2-201ENST00000341472 C5orf51A6NDU8 294 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 ZNF98A6NK75 572 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 ISLRO14498 428 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 PAX9P55771 341 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 CYCSP99999 105 aaKnown RBP14.6□□□□□ -0.07
SYNE2-201ENST00000341472 FOXI2Q6ZQN5 318 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 RSG1Q9BU20 258 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 SLC25A22Q9H936 323 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 MGAT4CQ9UBM8 478 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 AGRNO00468 2067 aa14.6□□□□□ -0.07
SYNE2-201ENST00000341472 PMS2P5A8MQ11 134 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 SOCS3O14543 225 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 GOSR2O14653 212 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 SCGB1D2O95969 90 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 IGKV3-20P01619 116 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 DEFB1P60022 68 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 GDF5OSQ5U4N7 250 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 CYP2G1PQ6ZSU1 146 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 ZBTB8BQ8NAP8 495 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-201ENST00000341472 OR1B1Q8NGR6 318 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 C2CD4CQ8TF44 421 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 C16orf92Q96LL3 132 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 C2orf50Q96LR7 162 aa14.59□□□□□ -0.07
SYNE2-201ENST00000341472 SAV1Q9H4B6 383 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-201ENST00000341472 EPPK1P58107 5090 aaKnown RBP14.59□□□□□ -0.07
SYNE2-201ENST00000341472 FAM25EA8MYX2 175 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 METTL15P1P0C7V9 234 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 MEOX2P50222 304 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 TAS2R30P59541 319 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 FCN2Q15485 313 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 SPATA31B1PQ5VZV4 182 aa14.58□□□□□ -0.08
SYNE2-201ENST00000341472 EBLN2Q6P2I7 272 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms