RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MOB1BQ7L9L4 216 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 TCF24Q7RTU0 167 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 KCNIP2Q9NS61 270 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 GNG12Q9UBI6 72 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 ZANQ9Y493 2812 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 ZNF134P52741 427 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 HSD52Q0P140 79 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 PRAMEF5Q5TYX0 476 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 LINC00173Q6ZV60 143 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 PPP1R35Q8TAP8 253 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
BRAT1-201ENST00000340611 CALYQ9NYX4 217 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
BRAT1-201ENST00000340611 RRHO14718 337 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 P0C879 139 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 RHOBP62745 196 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 ZNF645Q8N7E2 425 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 OR8B3Q8NGG8 313 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 C15orf62A8K5M9 175 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 CD1BP29016 333 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 RPL31P62899 125 aaKnown RBP12.17□□□□□ -0.46
BRAT1-201ENST00000340611 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 NPFFR1Q9GZQ6 430 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 GEMIN7Q9H840 131 aaKnown RBP12.17□□□□□ -0.46
BRAT1-201ENST00000340611 TECRQ9NZ01 308 aaKnown RBP12.17□□□□□ -0.46
BRAT1-201ENST00000340611 APCP25054 2843 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 SAA2-SAA4A0A096LPE2 208 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 LINC00869P0C866 280 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 OR2K2Q8NGT1 345 aa12.17□□□□□ -0.46
BRAT1-201ENST00000340611 TNFRSF13BO14836 293 aaPredicted RBP12.16□□□□□ -0.46
BRAT1-201ENST00000340611 SPINT2O43291 252 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 CA1P00915 261 aaPredicted RBP12.16□□□□□ -0.46
BRAT1-201ENST00000340611 APCSP02743 223 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 GATA3P23771 443 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 NDUFB3O43676 98 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 SLC25A17O43808 307 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 OR10J4P0C629 311 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 GPR183P32249 361 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 C1orf229Q6ZS94 237 aaPredicted RBP12.16□□□□□ -0.46
BRAT1-201ENST00000340611 C18orf32Q8TCD1 76 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 SSMEM1Q8WWF3 244 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 WDR83OSQ9Y284 106 aa12.16□□□□□ -0.46
BRAT1-201ENST00000340611 YTHDF2Q9Y5A9 579 aaKnown RBP12.16□□□□□ -0.46
BRAT1-201ENST00000340611 GAGE12HA6NDE8 117 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 HTR1DP28221 377 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 LOXL3P58215 753 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
BRAT1-201ENST00000340611 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 OR10AG1Q8NH19 301 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 C2orf70A6NJV1 201 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 LINC00473A8K010 186 aa12.15□□□□□ -0.46
BRAT1-201ENST00000340611 K7EP34 96 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 CATR1Q13166 79 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 SPATA31B1PQ5VZV4 182 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 CGB3P0DN86 165 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 CGB7P0DN87 165 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 RAB31Q13636 194 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
BRAT1-201ENST00000340611 RPL39P5Q59GN2 51 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
BRAT1-201ENST00000340611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-201ENST00000340611 SCGB1A1P11684 91 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
BRAT1-201ENST00000340611 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 J3QR06 171 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 PROP1O75360 226 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 HIST1H1EP10412 219 aaKnown RBP12.13□□□□□ -0.47
BRAT1-201ENST00000340611 V9GYV3 84 aa12.13□□□□□ -0.47
BRAT1-201ENST00000340611 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 REG1AP05451 166 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 MGST2Q99735 147 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 ABCA2Q9BZC7 2435 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 ISLRO14498 428 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 FOXH1O75593 365 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 IGFBPL1Q8WX77 278 aa12.12□□□□□ -0.47
BRAT1-201ENST00000340611 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-201ENST00000340611 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms