RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
RET-201ENST00000340058 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
RET-201ENST00000340058 HBBP68871 147 aa11.93□□□□□ -0.5
RET-201ENST00000340058 FAM90A2PQ658T7 463 aa11.93□□□□□ -0.5
RET-201ENST00000340058 A0A1W2PS18 150 aa11.92□□□□□ -0.5
RET-201ENST00000340058 IFITM10A6NMD0 228 aa11.92□□□□□ -0.5
RET-201ENST00000340058 HOXA5P20719 270 aa11.92□□□□□ -0.5
RET-201ENST00000340058 NBL1P41271 181 aa11.92□□□□□ -0.5
RET-201ENST00000340058 TBL2Q9Y4P3 447 aaKnown RBP11.92□□□□□ -0.5
RET-201ENST00000340058 CDH23Q9H251 3354 aa11.92□□□□□ -0.5
RET-201ENST00000340058 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
RET-201ENST00000340058 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
RET-201ENST00000340058 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
RET-201ENST00000340058 DDTP30046 118 aa11.92□□□□□ -0.5
RET-201ENST00000340058 ADMP35318 185 aa11.92□□□□□ -0.5
RET-201ENST00000340058 ZNF726P1Q15940 193 aa11.92□□□□□ -0.5
RET-201ENST00000340058 TMEM136Q6ZRR5 245 aa11.92□□□□□ -0.5
RET-201ENST00000340058 CIARTQ8N365 385 aaPredicted RBP11.92□□□□□ -0.5
RET-201ENST00000340058 C14orf144Q96I85 54 aa11.92□□□□□ -0.5
RET-201ENST00000340058 ARHGAP32A7KAX9 2087 aa11.92□□□□□ -0.5
RET-201ENST00000340058 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
RET-201ENST00000340058 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
RET-201ENST00000340058 TUBA4BQ9H853 241 aa11.92□□□□□ -0.5
RET-201ENST00000340058 H3BUX3 64 aa11.92□□□□□ -0.5
RET-201ENST00000340058 ID1P41134 155 aa11.92□□□□□ -0.5
RET-201ENST00000340058 SPATA45Q537H7 98 aa11.92□□□□□ -0.5
RET-201ENST00000340058 FBLN7Q53RD9 439 aa11.92□□□□□ -0.5
RET-201ENST00000340058 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
RET-201ENST00000340058 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
RET-201ENST00000340058 Q8TAT8 98 aa11.91□□□□□ -0.5
RET-201ENST00000340058 A0A1W2PRE2 83 aa11.91□□□□□ -0.5
RET-201ENST00000340058 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
RET-201ENST00000340058 IGKV2-40A0A087WW87 121 aaPredicted RBP11.91□□□□□ -0.5
RET-201ENST00000340058 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
RET-201ENST00000340058 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
RET-201ENST00000340058 IGKV2D-40P01614 121 aaPredicted RBP11.91□□□□□ -0.5
RET-201ENST00000340058 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
RET-201ENST00000340058 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
RET-201ENST00000340058 SCGB1D4Q6XE38 83 aa11.91□□□□□ -0.5
RET-201ENST00000340058 PSG9Q00887 426 aa11.9□□□□□ -0.5
RET-201ENST00000340058 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
RET-201ENST00000340058 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
RET-201ENST00000340058 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
RET-201ENST00000340058 PTPRSQ13332 1948 aa11.9□□□□□ -0.5
RET-201ENST00000340058 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
RET-201ENST00000340058 SAA4P35542 130 aa11.9□□□□□ -0.5
RET-201ENST00000340058 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
RET-201ENST00000340058 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
RET-201ENST00000340058 GSN-AS1Q9NRJ2 163 aa11.9□□□□□ -0.5
RET-201ENST00000340058 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
RET-201ENST00000340058 CTSZQ9UBR2 303 aa11.9□□□□□ -0.5
RET-201ENST00000340058 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
RET-201ENST00000340058 FAM71F2Q6NXP2 309 aa11.89□□□□□ -0.51
RET-201ENST00000340058 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
RET-201ENST00000340058 PKD1L2Q7Z442 2459 aa11.89□□□□□ -0.51
RET-201ENST00000340058 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
RET-201ENST00000340058 PMCHL1Q16048 86 aa11.89□□□□□ -0.51
RET-201ENST00000340058 ATG101Q9BSB4 218 aa11.89□□□□□ -0.51
RET-201ENST00000340058 Q1RN00 199 aa11.89□□□□□ -0.51
RET-201ENST00000340058 C22orf34Q6ZV56 151 aa11.89□□□□□ -0.51
RET-201ENST00000340058 PSG8Q9UQ74 426 aa11.89□□□□□ -0.51
RET-201ENST00000340058 FBLL1A6NHQ2 334 aaKnown RBP11.88□□□□□ -0.51
RET-201ENST00000340058 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
RET-201ENST00000340058 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
RET-201ENST00000340058 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
RET-201ENST00000340058 FAM90A9PA6NNJ1 464 aa11.88□□□□□ -0.51
RET-201ENST00000340058 TAS2R60P59551 318 aa11.88□□□□□ -0.51
RET-201ENST00000340058 G3V318 75 aa11.88□□□□□ -0.51
RET-201ENST00000340058 SAPCD1Q5SSQ6 148 aa11.88□□□□□ -0.51
RET-201ENST00000340058 Q8NFD4 153 aa11.88□□□□□ -0.51
RET-201ENST00000340058 PLA2G2EQ9NZK7 142 aa11.88□□□□□ -0.51
RET-201ENST00000340058 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
RET-201ENST00000340058 GATA4P43694 442 aa11.88□□□□□ -0.51
RET-201ENST00000340058 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
RET-201ENST00000340058 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
RET-201ENST00000340058 VPS25Q9BRG1 176 aa11.87□□□□□ -0.51
RET-201ENST00000340058 APOHP02749 345 aaPredicted RBP11.87□□□□□ -0.51
RET-201ENST00000340058 VDAC2P45880 294 aaPredicted RBP11.87□□□□□ -0.51
RET-201ENST00000340058 IGFL2Q6UWQ7 119 aa11.87□□□□□ -0.51
RET-201ENST00000340058 TNFRSF14Q92956 283 aa11.87□□□□□ -0.51
RET-201ENST00000340058 HIST1H2BLQ99880 126 aa11.87□□□□□ -0.51
RET-201ENST00000340058 TMEM14BQ9NUH8 114 aa11.87□□□□□ -0.51
RET-201ENST00000340058 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
RET-201ENST00000340058 TMEM131Q92545 1883 aa11.87□□□□□ -0.51
RET-201ENST00000340058 A0A1B0GWJ7 208 aa11.87□□□□□ -0.51
RET-201ENST00000340058 C22orf46C9J442 243 aa11.86□□□□□ -0.51
RET-201ENST00000340058 FXYD7P58549 80 aa11.86□□□□□ -0.51
RET-201ENST00000340058 Q6ZPA2 131 aa11.86□□□□□ -0.51
RET-201ENST00000340058 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
RET-201ENST00000340058 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
RET-201ENST00000340058 NUDT3O95989 172 aa11.85□□□□□ -0.51
RET-201ENST00000340058 PRTN3P24158 256 aa11.85□□□□□ -0.51
RET-201ENST00000340058 UTF1Q5T230 341 aa11.85□□□□□ -0.51
RET-201ENST00000340058 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
RET-201ENST00000340058 DDB2Q92466 427 aa11.85□□□□□ -0.51
RET-201ENST00000340058 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
RET-201ENST00000340058 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
RET-201ENST00000340058 C7orf71A4D174 169 aa11.85□□□□□ -0.51
RET-201ENST00000340058 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
RET-201ENST00000340058 CTAG1AP78358 180 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms