RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 MAP1LC3B2A6NCE7 125 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 I3L521 148 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 HMGB3O15347 200 aaKnown RBP6.02□□□□□ -1.45
TMC1-202ENST00000340019 LGALS1P09382 135 aaKnown RBP6.02□□□□□ -1.45
TMC1-202ENST00000340019 STAG3L2P0CL84 134 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 STAG3L3P0CL85 134 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 RELQ04864 619 aaPredicted RBP6.02□□□□□ -1.45
TMC1-202ENST00000340019 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 MIR17HGQ75NE6 70 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 RNF2Q99496 336 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 MAP1LC3BQ9GZQ8 125 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 SETD2Q9BYW2 2564 aaPredicted RBP6.02□□□□□ -1.45
TMC1-202ENST00000340019 IGHV3-35A0A0C4DH35 117 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 CCL20P78556 96 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 FAM167A-AS1Q96KT0 104 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 OR5B12Q96R08 314 aa6.02□□□□□ -1.45
TMC1-202ENST00000340019 GGCTO75223 188 aaKnown RBP6.01□□□□□ -1.45
TMC1-202ENST00000340019 HBE1P02100 147 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 FGF8P55075 233 aaPredicted RBP6.01□□□□□ -1.45
TMC1-202ENST00000340019 C18orf65Q6ZTR6 163 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 CCDC28AQ8IWP9 274 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 C4orf3Q8WVX3 66 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 PBDC1Q9BVG4 233 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 SLC25A2Q9BXI2 301 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 SLC25A39Q9BZJ4 359 aaPredicted RBP6.01□□□□□ -1.45
TMC1-202ENST00000340019 HIGD1AQ9Y241 93 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 JMJD1CQ15652 2540 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 TEX46H3BTG2 121 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 NDUFA4O00483 81 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 CD28P10747 220 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
TMC1-202ENST00000340019 TRAV5A0A0B4J249 113 aa6□□□□□ -1.45
TMC1-202ENST00000340019 A0A1B0GV50 99 aa6□□□□□ -1.45
TMC1-202ENST00000340019 H3BRN7 92 aa6□□□□□ -1.45
TMC1-202ENST00000340019 ARL14EPLP0DKL9 152 aa6□□□□□ -1.45
TMC1-202ENST00000340019 C8orf88P0DMB2 117 aa6□□□□□ -1.45
TMC1-202ENST00000340019 PMS2P11Q13670 270 aa6□□□□□ -1.45
TMC1-202ENST00000340019 UNQ9165/PRO28630Q6UXU0 137 aa6□□□□□ -1.45
TMC1-202ENST00000340019 IL34Q6ZMJ4 242 aa6□□□□□ -1.45
TMC1-202ENST00000340019 SHANK2-AS3Q9BTD1 123 aa6□□□□□ -1.45
TMC1-202ENST00000340019 SCRT1Q9BWW7 348 aa6□□□□□ -1.45
TMC1-202ENST00000340019 TECRQ9NZ01 308 aaKnown RBP6□□□□□ -1.45
TMC1-202ENST00000340019 A0A1B0GUS0 222 aa6□□□□□ -1.45
TMC1-202ENST00000340019 NUDT19A8MXV4 375 aa6□□□□□ -1.45
TMC1-202ENST00000340019 HSPB1P04792 205 aaKnown RBP6□□□□□ -1.45
TMC1-202ENST00000340019 KRTAP10-3P60369 221 aa6□□□□□ -1.45
TMC1-202ENST00000340019 HIST2H2BDQ6DRA6 164 aa6□□□□□ -1.45
TMC1-202ENST00000340019 GPHB5Q86YW7 130 aa6□□□□□ -1.45
TMC1-202ENST00000340019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6□□□□□ -1.45
TMC1-202ENST00000340019 MARC2Q969Z3 335 aa6□□□□□ -1.45
TMC1-202ENST00000340019 TMPRSS5Q9H3S3 457 aa6□□□□□ -1.45
TMC1-202ENST00000340019 PFDN2Q9UHV9 154 aa6□□□□□ -1.45
TMC1-202ENST00000340019 IGHV4OR15-8A0A075B7B6 117 aa6□□□□□ -1.45
TMC1-202ENST00000340019 A0A087WW49 117 aa6□□□□□ -1.45
TMC1-202ENST00000340019 CXorf1O96002 111 aa6□□□□□ -1.45
TMC1-202ENST00000340019 TAS2R45P59539 299 aa6□□□□□ -1.45
TMC1-202ENST00000340019 KHDC3LQ587J8 217 aa6□□□□□ -1.45
TMC1-202ENST00000340019 COMMD7Q86VX2 200 aa6□□□□□ -1.45
TMC1-202ENST00000340019 TMEM190Q8WZ59 177 aa6□□□□□ -1.45
TMC1-202ENST00000340019 CITED2Q99967 270 aaPredicted RBP6□□□□□ -1.45
TMC1-202ENST00000340019 RABAC1Q9UI14 185 aa6□□□□□ -1.45
TMC1-202ENST00000340019 IGHV3OR16-8A0A075B7F1 116 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 LEMD1Q68G75 181 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 PQLC2Q6ZP29 291 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 EIF4E3Q8N5X7 224 aaKnown RBP5.99□□□□□ -1.45
TMC1-202ENST00000340019 C11orf44Q8N8P7 122 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 TSSC4Q9Y5U2 329 aaPredicted RBP5.99□□□□□ -1.45
TMC1-202ENST00000340019 U3KQE9 123 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 RAB19A4D1S5 217 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 ZNF98A6NK75 572 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 CRYBB3P26998 211 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 GCHFRP30047 84 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 PSMB3P49720 205 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 KLHL30-AS1Q8NEE0 82 aa5.99□□□□□ -1.45
TMC1-202ENST00000340019 ADARB2-AS1A8MUL3 147 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 MRPS12O15235 138 aaKnown RBP5.98□□□□□ -1.45
TMC1-202ENST00000340019 BUB3O43684 328 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 GP9P14770 177 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 FOXL1Q12952 345 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 RPEL1Q2QD12 228 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 DEFB136Q30KP8 78 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 KHDC1LQ5JSQ8 128 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 DMRTA1Q5VZB9 504 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 S100A7AQ86SG5 101 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 STXBP6Q8NFX7 210 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 FXYD5Q96DB9 178 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 METTL26Q96S19 204 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 TMEM14CQ9P0S9 112 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 OR7C2O60412 319 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 APOHP02749 345 aaPredicted RBP5.98□□□□□ -1.45
TMC1-202ENST00000340019 HOXD3P31249 432 aaPredicted RBP5.98□□□□□ -1.45
TMC1-202ENST00000340019 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
TMC1-202ENST00000340019 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 REC114Q7Z4M0 266 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 PRIMA1Q86XR5 153 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 OR11H1Q8NG94 326 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 C20orf24Q9BUV8 137 aa5.98□□□□□ -1.45
TMC1-202ENST00000340019 OR51M1Q9H341 326 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms