RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 EMP1P54849 157 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 ATP5IP56385 69 aaPredicted RBP9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 AP3S2P59780 193 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 POLR2GP62487 172 aaKnown RBP eCLIP9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 TMEM41BQ5BJD5 291 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 OR8I2Q8N0Y5 310 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 THAP8Q8NA92 274 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 SDHCQ99643 169 aaPredicted RBP9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 SLC25A21Q9BQT8 299 aaPredicted RBP9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 SRRQ9GZT4 340 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 SLC35B3Q9H1N7 401 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 HRH4Q9H3N8 390 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 SEPSECSQ9HD40 501 aaKnown RBP9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
NUDCD3-201ENST00000338427 C9orf170A2RU37 121 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 CCNKO75909 580 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 PRM2P04554 102 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 SLC25A6P12236 298 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 ORM2P19652 201 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 CENPSQ8N2Z9 138 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 SLC25A32Q9H2D1 315 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 SAV1Q9H4B6 383 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 TMED3Q9Y3Q3 217 aa9.59□□□□□ -0.87
NUDCD3-201ENST00000338427 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 TRAV10A0A0B4J240 114 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 C11orf94C9JXX5 98 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 MED6O75586 246 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF705DP0CH99 300 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF705BP0CI00 300 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 ID1P41134 155 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 ID3Q02535 119 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 FAM78BQ5VT40 261 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
NUDCD3-201ENST00000338427 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF98A6NK75 572 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 ANXA7P20073 488 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 PAX9P55771 341 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 NUTF2P61970 127 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 C1orf194Q5T5A4 169 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 DOK5Q9P104 306 aa9.57□□□□□ -0.88
NUDCD3-201ENST00000338427 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 PMS2P5A8MQ11 134 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 ZNF705FA8MVS1 300 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 PSMB3P49720 205 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 ACOT7LQ6ZUV0 252 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 COQ8AQ8NI60 647 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 C16orf92Q96LL3 132 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 C1QTNF4Q9BXJ3 329 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 PFDN2Q9UHV9 154 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 STRAPQ9Y3F4 350 aaKnown RBP9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 HERC2O95714 4834 aa9.56□□□□□ -0.88
NUDCD3-201ENST00000338427 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 A0A0J9YX75 114 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 SMCO3A2RU48 225 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 NDUFB6O95139 128 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 FABP1P07148 127 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 OR4E1P0C645 316 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 BTCP35070 178 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 TCTAP57738 103 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 RRAS2P62070 204 aaPredicted RBP9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 PSG9Q00887 426 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 AKR1C1Q04828 323 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 FGL1Q08830 312 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 SPANXN2Q5MJ10 180 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 RNF182Q8N6D2 247 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
NUDCD3-201ENST00000338427 ISLRO14498 428 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 SSSCA1O60232 199 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 SNRPCP09234 159 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 INPP1P49441 399 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 RPP30P78346 268 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 EBLN2Q6P2I7 272 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 CYP2G1PQ6ZSU1 146 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 TMEM144Q7Z5S9 345 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 BPIFCQ8NFQ6 507 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 NEU1Q99519 415 aa9.54□□□□□ -0.88
NUDCD3-201ENST00000338427 M0R2N4 97 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 SCGB1D2O95969 90 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 IL5P05113 134 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 METTL15P1P0C7V9 234 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 NUP62P37198 522 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 GALR1P47211 349 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 FAM222AQ5U5X8 452 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 AMTNQ6UX39 209 aa9.53□□□□□ -0.88
NUDCD3-201ENST00000338427 PATE2Q6UY27 113 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms