RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 LPAR2Q9HBW0 351 aa13.17□□□□□ -0.3
TMEM39B-201ENST00000336294 C1RLQ9NZP8 487 aa13.17□□□□□ -0.3
TMEM39B-201ENST00000336294 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
TMEM39B-201ENST00000336294 DCHS2Q6V1P9 2916 aa13.17□□□□□ -0.3
TMEM39B-201ENST00000336294 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 ZNF705GA8MUZ8 300 aaPredicted RBP13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 TOMM40O96008 361 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 IGHV4-39P01824 125 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 CRISP2P16562 243 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 FAM208BQ5VWN6 2430 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 CBLN1P23435 193 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 BRS3P32247 399 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 UBE2G1P62253 170 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 GNG5P63218 68 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 NDPQ00604 133 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 KLF17Q5JT82 389 aaPredicted RBP13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 ZNF48Q96MX3 618 aaPredicted RBP13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
TMEM39B-201ENST00000336294 TRAV34A0A0B4J273 112 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 MFAP4P55083 255 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 NHLRC2Q8NBF2 726 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 Q9H3A6 140 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 THYN1Q9P016 225 aa13.15□□□□□ -0.3
TMEM39B-201ENST00000336294 IGSF10Q6WRI0 2623 aa13.15□□□□□ -0.31
TMEM39B-201ENST00000336294 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SNURFLB1AK76 121 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 GNG7O60262 68 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SAA4P35542 130 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 FAM231DQ6ZW35 169 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 Q8N9W7 124 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 ATG101Q9BSB4 218 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SERTAD4Q9NUC0 356 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 NAGKQ9UJ70 344 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 ZFYVE26Q68DK2 2539 aa13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
TMEM39B-201ENST00000336294 SMIM27A0A1W2PRY6 76 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 TMEM190Q8WZ59 177 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 RNF125Q96EQ8 232 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 POLR3KQ9Y2Y1 108 aaPredicted RBP13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 IGHV7-81A0A0B4J1V7 117 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 H3BRN7 92 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 IER3P46695 156 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 FAM120AOSQ5T036 256 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 S100A7AQ86SG5 101 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 ZNF491Q8N8L2 437 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 FMC1Q96HJ9 113 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 CCL19Q99731 98 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
TMEM39B-201ENST00000336294 WI2-2373I1.2A0A1W2PRP0 233 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 NPFFO15130 113 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 AMY1AP04745 511 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 IL4P05112 153 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 C1orf194Q5T5A4 169 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
TMEM39B-201ENST00000336294 H3BTX0 84 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 SCGB2A1O75556 95 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 SCGB1D1O95968 90 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 TCRAP04437 139 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 Q56UQ5 140 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 GPR82Q96P67 336 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 S4R3C0 116 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 SSTP61278 116 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 FAM168AQ92567 244 aa13.11□□□□□ -0.31
TMEM39B-201ENST00000336294 GRIFINA4D1Z8 144 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms