RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TUBA4BQ9H853 241 aa9.99□□□□□ -0.81
LIMK1-201ENST00000336180 AMMECR1Q9Y4X0 333 aaPredicted RBP9.99□□□□□ -0.81
LIMK1-201ENST00000336180 NAV2Q8IVL1 2488 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 A0A1B0GUS0 222 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 NBR2O15453 112 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 RIPPLY3P57055 190 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 TECRQ9NZ01 308 aaKnown RBP9.98□□□□□ -0.81
LIMK1-201ENST00000336180 GZMBP10144 247 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 PRR27Q6MZM9 219 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 C8orf31Q8N9H6 132 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 C8orf46Q8TAG6 207 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 KCNIP2Q9NS61 270 aa9.98□□□□□ -0.81
LIMK1-201ENST00000336180 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 TRGC1P0CF51 173 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 SAA4P35542 130 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 LMO4P61968 165 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 CX3CL1P78423 397 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 DNLZQ5SXM8 178 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 FAM167A-AS1Q96KT0 104 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 OR5B12Q96R08 314 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 TBX15Q96SF7 602 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 BRS3P32247 399 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 SELENOTP62341 195 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
LIMK1-201ENST00000336180 FAM71F2Q6NXP2 309 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 SONP18583 2426 aaKnown RBP9.97□□□□□ -0.81
LIMK1-201ENST00000336180 NBPF19A0A087WUL8 3843 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 A0A087WWC5 75 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 ZNF320A2RRD8 509 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 PSG1P11464 419 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 CCL19Q99731 98 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 PAXXQ9BUH6 204 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 ZFP30Q9Y2G7 519 aa9.97□□□□□ -0.81
LIMK1-201ENST00000336180 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
LIMK1-201ENST00000336180 CHD6Q8TD26 2715 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 PDE6DO43924 150 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 OR2J3O76001 311 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 ATP5J2P56134 94 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 ZNF48Q96MX3 618 aaPredicted RBP9.96□□□□□ -0.81
LIMK1-201ENST00000336180 MS4A10Q96PG2 267 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 SERTAD4Q9NUC0 356 aa9.96□□□□□ -0.81
LIMK1-201ENST00000336180 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.82
LIMK1-201ENST00000336180 OR11H6Q8NGC7 330 aa9.96□□□□□ -0.82
LIMK1-201ENST00000336180 C17orf77Q96MU5 243 aa9.96□□□□□ -0.82
LIMK1-201ENST00000336180 IMMP2LQ96T52 175 aa9.96□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 LY6EQ16553 131 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 SGMS2Q8NHU3 365 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 RNASEH2CQ8TDP1 164 aaKnown RBP9.95□□□□□ -0.82
LIMK1-201ENST00000336180 CACNG8Q8WXS5 425 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 MDFIC2A0A1B0GVS7 189 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 PSMB11A5LHX3 300 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 PFN1P07737 140 aaKnown RBP9.95□□□□□ -0.82
LIMK1-201ENST00000336180 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 HELTA6NFD8 242 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 ODF3BA8MYP8 253 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 G3V318 75 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 GGCTO75223 188 aaKnown RBP9.95□□□□□ -0.82
LIMK1-201ENST00000336180 CEACAM3P40198 252 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 SFRP2Q96HF1 295 aa9.95□□□□□ -0.82
LIMK1-201ENST00000336180 TRAV8-1A0A0A6YYK1 113 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 TMUB1Q9BVT8 246 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 SIRPDQ9H106 197 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV3-66A0A0C4DH42 116 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 JOSD1Q15040 202 aaPredicted RBP9.94□□□□□ -0.82
LIMK1-201ENST00000336180 HIST2H2BCQ6DN03 193 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 EXOC3-AS1Q8N2X6 119 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 OR1P1Q8NH06 330 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 OR2T8A6NH00 312 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 B4DEV8 164 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 M0R1W7 72 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 GNG4P50150 75 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 TAS2R45P59539 299 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 IGFL4Q6B9Z1 124 aa9.94□□□□□ -0.82
LIMK1-201ENST00000336180 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms