RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■■■■■ 30.8
VPS33B-201ENST00000333371 TMEM30BQ3MIR4 351 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 VSTM2AQ8TAG5 236 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 GTSF1Q8WW33 167 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 LRRC10Q5BKY1 277 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 TMEM186Q96B77 213 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 PGLYRP4Q96LB8 373 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 FAM181BA6NEQ2 426 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 INS-IGF2F8WCM5 200 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 DLX6P56179 175 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 VMA21Q3ZAQ7 101 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 LINC00173Q6ZV60 143 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 C11orf42Q8N5U0 333 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 WIPF2Q8TF74 440 aaPredicted RBP9.84□□□□□ -0.83
VPS33B-201ENST00000333371 CACNA1BQ00975 2339 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
VPS33B-201ENST00000333371 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
VPS33B-201ENST00000333371 NDUFB8O95169 186 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 IGHV1-8P0DP01 117 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 HIST1H1EP10412 219 aaKnown RBP9.83□□□□□ -0.84
VPS33B-201ENST00000333371 HINT1P49773 126 aaPredicted RBP9.83□□□□□ -0.84
VPS33B-201ENST00000333371 NHLH1Q02575 133 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 PERPQ96FX8 193 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 MRPL27Q9P0M9 148 aaKnown RBP9.83□□□□□ -0.84
VPS33B-201ENST00000333371 RAXQ9Y2V3 346 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 IGF2RP11717 2491 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
VPS33B-201ENST00000333371 DMRTA1Q5VZB9 504 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 EXOC3-AS1Q8N2X6 119 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 CIARTQ8N365 385 aaPredicted RBP9.83□□□□□ -0.84
VPS33B-201ENST00000333371 VKORC1Q9BQB6 163 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 Q9H3A6 140 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 DYNLRB1Q9NP97 96 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
VPS33B-201ENST00000333371 A0A1B0GXF2 115 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 C2orf70A6NJV1 201 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 GP9P14770 177 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 ZNF138P52744 262 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 UCNP55089 124 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 TMEM155Q4W5P6 130 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 COL5A1-AS1Q5SY13 56 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 OR4A5Q8NH83 315 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 GPR82Q96P67 336 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 OR8B2Q96RD0 313 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 MCRIP2Q9BUT9 160 aaKnown RBP9.82□□□□□ -0.84
VPS33B-201ENST00000333371 MLST8Q9BVC4 326 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
VPS33B-201ENST00000333371 LYZP61626 148 aa9.82□□□□□ -0.84
VPS33B-201ENST00000333371 RNASE6Q93091 150 aaKnown RBP9.82□□□□□ -0.84
VPS33B-201ENST00000333371 RPP21Q9H633 154 aaKnown RBP9.82□□□□□ -0.84
VPS33B-201ENST00000333371 CRYGCP07315 174 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 IGLL1P15814 213 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 MRPL52Q86TS9 123 aaKnown RBP9.81□□□□□ -0.84
VPS33B-201ENST00000333371 LINC00311Q8N616 119 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 FBXL15Q9H469 300 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 ANKHD1Q8IWZ3 2542 aaKnown RBP9.81□□□□□ -0.84
VPS33B-201ENST00000333371 TCRAP04437 139 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 COX7A1P24310 79 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
VPS33B-201ENST00000333371 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 OR8B3Q8NGG8 313 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 KLF12Q9Y4X4 402 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 TIMM8BQ9Y5J9 83 aaPredicted RBP9.81□□□□□ -0.84
VPS33B-201ENST00000333371 ZFHX3Q15911 3703 aa9.81□□□□□ -0.84
VPS33B-201ENST00000333371 HRNRQ86YZ3 2850 aaPredicted RBP9.81□□□□□ -0.84
VPS33B-201ENST00000333371 E7EQL1 145 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 SIAH2O43255 324 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 OR2J3O76001 311 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 P01737 135 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 PSG1P11464 419 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 TSPOP30536 169 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 RASL11AQ6T310 242 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 UNQ5815/PRO19632Q6UWF5 114 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 ZNF596Q8TC21 504 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 C17orf77Q96MU5 243 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 TMEM133Q9H2Q1 129 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 S4R3C0 116 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 FAM90A27PA6NNH2 459 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 TCF21O43680 179 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 HBBP68871 147 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 FAM120AOSQ5T036 256 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 SIGLEC9Q9Y336 463 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 LTAP01374 205 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 TRGV9Q99603 122 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 PRSS22Q9GZN4 317 aa9.8□□□□□ -0.84
VPS33B-201ENST00000333371 IGHV2-26A0A0B4J1V2 119 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 C19orf71A6NCJ1 209 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 CD3EP07766 207 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 MC5RP33032 325 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 GAGE1Q13065 139 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 GOLT1AQ6ZVE7 132 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 C5orf17Q8NAS9 161 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 TMEM116Q8NCL8 245 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 SHISA9B4DS77 424 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
VPS33B-201ENST00000333371 H0Y8G0 127 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms