RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 F2Z2F3 143 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 SERF1AO75920 110 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 MT-CO2P00403 227 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 CRISP2P16562 243 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 SERF2P84101 59 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 PRR31Q5SQ13 230 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
PDGFB-201ENST00000331163 PXMP4Q9Y6I8 212 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 F6UZH7 168 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 M0R1W7 72 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 IER3P46695 156 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 TCL1AP56279 114 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
PDGFB-201ENST00000331163 IGLV1-47P01700 117 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 IGHV4-59P01825 116 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 RAB4AP20338 218 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 WT1-ASQ06250 92 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 TCTEX1D1Q8N7M0 179 aa12.69□□□□□ -0.38
PDGFB-201ENST00000331163 BLCAPP62952 87 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 CTXND1A0A1B0GTU2 59 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 OR2T8A6NH00 312 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-201ENST00000331163 LINC00869P0C866 280 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 TPPP2P59282 170 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 ANAPC16Q96DE5 110 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 LOC102724200A0A096LPH7 203 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-201ENST00000331163 PTTG1IPP53801 180 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 RELQ04864 619 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-201ENST00000331163 TMEM183BQ1AE95 376 aa12.68□□□□□ -0.38
PDGFB-201ENST00000331163 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 LINC01548A6NM66 108 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 FRMD6-AS1P0C7T7 363 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
PDGFB-201ENST00000331163 DLX6P56179 175 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 Q6ZWC4 215 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 OR5B3Q8NH48 314 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 RNF24Q9Y225 148 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 OVOL3O00110 214 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 RBFOX2O43251 390 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDGFB-201ENST00000331163 FBLN7Q53RD9 439 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 NPPCP23582 126 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 GPR183P32249 361 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 UBE2E1P51965 193 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 DEFB112Q30KQ8 113 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 OR5AU1Q8NGC0 362 aa12.67□□□□□ -0.38
PDGFB-201ENST00000331163 HINT1P49773 126 aaPredicted RBP12.66□□□□□ -0.38
PDGFB-201ENST00000331163 C5orf64Q2M2E5 130 aa12.66□□□□□ -0.38
PDGFB-201ENST00000331163 Q6ZN92 141 aa12.66□□□□□ -0.38
PDGFB-201ENST00000331163 PSMG3Q9BT73 122 aaPredicted RBP12.66□□□□□ -0.38
PDGFB-201ENST00000331163 SLC25A16P16260 332 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 AMTP48728 403 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 PRCDQ00LT1 54 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
PDGFB-201ENST00000331163 PAX1P15863 534 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 TMEM30BQ3MIR4 351 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 STPG3Q8N7X2 389 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 DDB2Q92466 427 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
PDGFB-201ENST00000331163 NBPF19A0A087WUL8 3843 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 FAM90A26D6RGX4 464 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 NDUFS8O00217 210 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 SSBP2P81877 361 aaPredicted RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 MRPL18Q9H0U6 180 aaKnown RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 C20orf202A1L168 122 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 DIRC3C9JPN6 131 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 M0QZK8 103 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 GGCTO75223 188 aaKnown RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 SUMO1P63165 101 aaKnown RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 TMEM177Q53S58 311 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 FAM19A2Q8N3H0 131 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 FBXL7Q9UJT9 491 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
PDGFB-201ENST00000331163 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 TRGV3P03979 118 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 WFDC3Q8IUB2 231 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 OR1L6Q8NGR2 347 aa12.64□□□□□ -0.39
PDGFB-201ENST00000331163 SCO2A0A1W2PP80 73 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 RANP62826 216 aaKnown RBP12.63□□□□□ -0.39
PDGFB-201ENST00000331163 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms