RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ARMS2P0C7Q2 107 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 PPIAL4FP0DN26 164 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 TCTAP57738 103 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 WT1-ASQ06250 92 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 C6orf15Q6UXA7 325 aaPredicted RBP10.24□□□□□ -0.77
CCDC60-201ENST00000327554 RPRMLQ8N4K4 120 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 CGB1A6NKQ9 187 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 H3BTX0 84 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 FABP2P12104 132 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 BMI1P35226 326 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 ZADH2Q8N4Q0 377 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 PRSS3P2Q8NHM4 247 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 Q9H3A6 140 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 PILRBQ9UKJ0 227 aa10.24□□□□□ -0.77
CCDC60-201ENST00000327554 TRAV8-1A0A0A6YYK1 113 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 M0R296 226 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 CECR9P0C854 216 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 GP9P14770 177 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 ORM2P19652 201 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 CFHR2P36980 270 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 RPL24P83731 157 aaKnown RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 GTSF1LQ9H1H1 148 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 C22orf46C9J442 243 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 CACNG7P62955 275 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 PSG3Q16557 428 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 MBNL2Q5VZF2 373 aaKnown RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 ZCCHC24Q8N2G6 241 aaKnown RBP10.23□□□□□ -0.77
CCDC60-201ENST00000327554 RND1Q92730 232 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
CCDC60-201ENST00000327554 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 CXCL12P48061 93 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 SAMD5Q5TGI4 173 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 MZT1Q08AG7 82 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 FAM201AQ5SY85 155 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 Q6ZT83 130 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 HARBI1Q96MB7 349 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
CCDC60-201ENST00000327554 COL25A1Q9BXS0 654 aaPredicted RBP10.22□□□□□ -0.77
CCDC60-201ENST00000327554 FCGR2BP31994 310 aaPredicted RBP10.21□□□□□ -0.77
CCDC60-201ENST00000327554 SMAGPQ0VAQ4 97 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 RIGQ13278 110 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 MSMPQ1L6U9 139 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 MOGAT3Q86VF5 341 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.77
CCDC60-201ENST00000327554 C18orf15Q96N68 181 aa10.21□□□□□ -0.77
CCDC60-201ENST00000327554 hADV38S2A0JD32 116 aa10.21□□□□□ -0.78
CCDC60-201ENST00000327554 LHBP01229 141 aa10.21□□□□□ -0.78
CCDC60-201ENST00000327554 SIGLEC8Q9NYZ4 499 aa10.21□□□□□ -0.78
CCDC60-201ENST00000327554 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
CCDC60-201ENST00000327554 NKX2-8O15522 239 aa10.2□□□□□ -0.78
CCDC60-201ENST00000327554 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
CCDC60-201ENST00000327554 TM4SF20Q53R12 229 aa10.2□□□□□ -0.78
CCDC60-201ENST00000327554 S100A7AQ86SG5 101 aa10.2□□□□□ -0.78
CCDC60-201ENST00000327554 MDS2Q8NDY4 140 aa10.2□□□□□ -0.78
CCDC60-201ENST00000327554 SRSF12Q8WXF0 261 aaKnown RBP10.2□□□□□ -0.78
CCDC60-201ENST00000327554 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
CCDC60-201ENST00000327554 TRGV5A0A0B4J1U4 118 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 SMIM13P0DJ93 91 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 ZNF833PQ6ZTB9 187 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 PRNTQ86SH4 94 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 FLYWCH2Q96CP2 140 aaKnown RBP10.19□□□□□ -0.78
CCDC60-201ENST00000327554 LINC00574Q9H8X3 128 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 RPUSD1Q9UJJ7 312 aaKnown RBP10.19□□□□□ -0.78
CCDC60-201ENST00000327554 F11RQ9Y624 299 aaKnown RBP10.19□□□□□ -0.78
CCDC60-201ENST00000327554 LOC389332A0A1B0GUA5 103 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 CFIP05156 583 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 NMUP48645 174 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 PAX8Q06710 450 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 TMEM167AQ8TBQ9 72 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
CCDC60-201ENST00000327554 TSSC4Q9Y5U2 329 aaPredicted RBP10.19□□□□□ -0.78
CCDC60-201ENST00000327554 A0A1B0GW15 77 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 KLRC4-KLRK1H3BQV0 150 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 FTH1P19P0C7X4 201 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 SUB1P53999 127 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC60-201ENST00000327554 FXYD2P54710 66 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 CD300EQ496F6 205 aaPredicted RBP10.18□□□□□ -0.78
CCDC60-201ENST00000327554 OTORQ9NRC9 128 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 PLXNB1O43157 2135 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 A0A1B0GV72 72 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 IGLV1-44P01699 117 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 CRYGCP07315 174 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 HOXC12P31275 282 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 FXYD7P58549 80 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 PMS2CLQ68D20 193 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 ZNF493Q6ZR52 646 aa10.18□□□□□ -0.78
CCDC60-201ENST00000327554 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms