RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 BLNKQ8WV28 456 aa12.83□□□□□ -0.36
USHBP1-202ENST00000324554 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
USHBP1-202ENST00000324554 SIGLEC9Q9Y336 463 aa12.83□□□□□ -0.36
USHBP1-202ENST00000324554 SPTAN1Q13813 2472 aaKnown RBP12.82□□□□□ -0.36
USHBP1-202ENST00000324554 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 PRRX1P54821 245 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 BATFQ16520 125 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 FBXL19-AS1Q494R0 122 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 PERPQ96FX8 193 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 TRGV9Q99603 122 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 SSBP4Q9BWG4 385 aaPredicted RBP12.82□□□□□ -0.36
USHBP1-202ENST00000324554 MALRD1Q5VYJ5 2156 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 GPR6P46095 362 aaPredicted RBP12.82□□□□□ -0.36
USHBP1-202ENST00000324554 TMEM116Q8NCL8 245 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 WNT10AQ9GZT5 417 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 EPDR1Q9UM22 224 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
USHBP1-202ENST00000324554 ASH1LQ9NR48 2969 aaKnown RBP12.82□□□□□ -0.36
USHBP1-202ENST00000324554 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 HIGD1CA8MV81 97 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 LY6HO94772 140 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 RASL11AQ6T310 242 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 STXBP6Q8NFX7 210 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 TMEM208Q9BTX3 173 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 CLEC7AQ9BXN2 247 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 SLC25A5P05141 298 aaKnown RBP12.81□□□□□ -0.36
USHBP1-202ENST00000324554 MUC15Q8N387 334 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 RPH3ALQ9UNE2 315 aa12.81□□□□□ -0.36
USHBP1-202ENST00000324554 PGPA6NDG6 321 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 LINC00322Q6ZN03 302 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-202ENST00000324554 PPP1R27Q86WC6 154 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 MRPL27Q9P0M9 148 aaKnown RBP12.8□□□□□ -0.36
USHBP1-202ENST00000324554 TEX22C9J3V5 150 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 CAMPP49913 170 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 UBE2G1P62253 170 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 ATOH7Q8N100 152 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 LPAR2Q9HBW0 351 aa12.8□□□□□ -0.36
USHBP1-202ENST00000324554 H3BTX0 84 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 FOSL1P15407 271 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 COX7A1P24310 79 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 LEMD1Q68G75 181 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 ALKBH7Q9BT30 221 aaPredicted RBP12.79□□□□□ -0.36
USHBP1-202ENST00000324554 KLF12Q9Y4X4 402 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 F11RQ9Y624 299 aaKnown RBP12.79□□□□□ -0.36
USHBP1-202ENST00000324554 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 PPIAL4CA0A0B4J2A2 164 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 HIST1H1EP10412 219 aaKnown RBP12.79□□□□□ -0.36
USHBP1-202ENST00000324554 PAX2Q02962 417 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 MAJINQ3KP22 176 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 GSX1Q9H4S2 264 aaPredicted RBP12.79□□□□□ -0.36
USHBP1-202ENST00000324554 USP24Q9UPU5 2620 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 ABCA1O95477 2261 aa12.79□□□□□ -0.36
USHBP1-202ENST00000324554 HYPMO75409 117 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 NBEAP1P0C6P0 100 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 IGLC2P0DOY2 106 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 IGLC3P0DOY3 106 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 GP9P14770 177 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 MMDQ15546 238 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 RPEQ96AT9 228 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 BORCS7Q96B45 105 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 MLST8Q9BVC4 326 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 A0A1B0GXF2 115 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 DLEU1O43261 78 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 TFPI2P48307 235 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-202ENST00000324554 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
USHBP1-202ENST00000324554 GPR82Q96P67 336 aa12.78□□□□□ -0.36
USHBP1-202ENST00000324554 OR2J3O76001 311 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 RBP4P02753 201 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 PLP1P60201 277 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 C8orf46Q8TAG6 207 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 HSBP1O75506 76 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 NPSP0C0P6 89 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 EBLN2Q6P2I7 272 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 SRSF12Q8WXF0 261 aaKnown RBP12.77□□□□□ -0.37
USHBP1-202ENST00000324554 CHRDL1Q9BU40 450 aa12.77□□□□□ -0.37
USHBP1-202ENST00000324554 OR2D3Q8NGH3 330 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 UQCR10Q9UDW1 63 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 C19orf84I3L1E1 186 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 PRB1P04280 392 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 IGLC1P0CG04 106 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 CD24P25063 80 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 RNASEKQ6P5S7 137 aaKnown RBP12.76□□□□□ -0.37
USHBP1-202ENST00000324554 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
USHBP1-202ENST00000324554 FLNCQ14315 2725 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms