RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 FAM168AQ92567 244 aa12.54□□□□□ -0.4
SMARCD2-202ENST00000323347 GPR82Q96P67 336 aa12.54□□□□□ -0.4
SMARCD2-202ENST00000323347 ATG101Q9BSB4 218 aa12.54□□□□□ -0.4
SMARCD2-202ENST00000323347 NAT8BQ9UHF3 227 aa12.54□□□□□ -0.4
SMARCD2-202ENST00000323347 LOC105371242A0A075B767 164 aa12.53□□□□□ -0.4
SMARCD2-202ENST00000323347 K7EIM0 57 aa12.53□□□□□ -0.4
SMARCD2-202ENST00000323347 SERF1AO75920 110 aa12.53□□□□□ -0.4
SMARCD2-202ENST00000323347 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
SMARCD2-202ENST00000323347 KIR3DL3Q8N743 410 aa12.53□□□□□ -0.4
SMARCD2-202ENST00000323347 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 IGKV1-17P01599 117 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 APELAP0DMC3 54 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 HIST1H1EP10412 219 aaKnown RBP12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 ARF6P62330 175 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 FMC1Q96HJ9 113 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 ZNF492Q9P255 531 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.4
SMARCD2-202ENST00000323347 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 LTAP01374 205 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 UBE2G1P62253 170 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 GNG5P63218 68 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 NHLRC2Q8NBF2 726 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 TSKUQ8WUA8 353 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 SLC25A39Q9BZJ4 359 aaPredicted RBP12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 OTORQ9NRC9 128 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 NAGKQ9UJ70 344 aa12.52□□□□□ -0.41
SMARCD2-202ENST00000323347 IGHV3-21A0A0B4J1V1 117 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 BMPR1BO00238 502 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 TCRAP04437 139 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 TCL1AP56279 114 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 PLGLAQ15195 96 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 MMDQ15546 238 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 CT83Q5H943 113 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 BAGE3Q86Y29 109 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 BLNKQ8WV28 456 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 RASL11BQ9BPW5 248 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 Q9H3A6 140 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 GSX1Q9H4S2 264 aaPredicted RBP12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 ADGRG4Q8IZF6 3080 aa12.51□□□□□ -0.41
SMARCD2-202ENST00000323347 LY6HO94772 140 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 GPR6P46095 362 aaPredicted RBP12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 EBI3Q14213 229 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 Q6ZWC4 215 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 ATP5L2Q7Z4Y8 100 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 NUP35Q8NFH5 326 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 C19orf71A6NCJ1 209 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 CNIH1O95406 144 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 CA1P00915 261 aaPredicted RBP12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 BRS3P32247 399 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 C5orf64Q2M2E5 130 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 C1orf194Q5T5A4 169 aa12.5□□□□□ -0.41
SMARCD2-202ENST00000323347 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 F2Z2F3 143 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 SPINK4O60575 86 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 PRB1P04280 392 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 SAPCD1Q5SSQ6 148 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 MRPL54Q6P161 138 aaKnown RBP12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 Q8N6K4 173 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 SHANK2-AS3Q9BTD1 123 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 KIR2DL5BA0A0G2JN68 375 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 KIR2DL5BA0A0G2JPC4 375 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 A0A1B0GXF2 115 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 OR2J3O76001 311 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 SCGB1D1O95968 90 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 APCSP02743 223 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 GPX1P07203 203 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 LYZP61626 148 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 SLC35B1P78383 322 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 MINOS1Q5TGZ0 78 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 LHFPL4Q7Z7J7 247 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 KIR2DL5AQ8N109 375 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 POLR3KQ9Y2Y1 108 aaPredicted RBP12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 MINOS1-NBL1R4GNA1 71 aa12.49□□□□□ -0.41
SMARCD2-202ENST00000323347 PLXNB1O43157 2135 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 TRAV30A0A087WSZ9 112 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 WI2-2373I1.2A0A1W2PRP0 233 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 H3BRN7 92 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 RPLP1P05386 114 aaKnown RBP12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 ZNF562Q6V9R5 426 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 HILPDAQ9Y5L2 63 aa12.48□□□□□ -0.41
SMARCD2-202ENST00000323347 TLN1Q9Y490 2541 aaKnown RBP12.47□□□□□ -0.41
SMARCD2-202ENST00000323347 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
SMARCD2-202ENST00000323347 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
SMARCD2-202ENST00000323347 NPIPB6E9PJ23 425 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms