RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IGHV3-72A0A0B4J1Y9 119 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 NCR2O95944 276 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 WFDC2Q14508 124 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 SLC25A48Q6ZT89 311 aaKnown RBP13.6□□□□□ -0.23
PACS1-201ENST00000320580 VCX2Q9H322 139 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 PRTN3P24158 256 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 Q6ZPA2 131 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 A0A1B0GW15 77 aa13.6□□□□□ -0.23
PACS1-201ENST00000320580 TRGV5A0A0B4J1U4 118 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 CRIP3Q6Q6R5 217 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 C6orf15Q6UXA7 325 aaPredicted RBP13.59□□□□□ -0.23
PACS1-201ENST00000320580 FAM90A9PA6NNJ1 464 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 IL11RAQ14626 422 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 AKAP6Q13023 2319 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 A8MWV9 139 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
PACS1-201ENST00000320580 TNRC6AQ8NDV7 1962 aaKnown RBP13.59□□□□□ -0.23
PACS1-201ENST00000320580 ZNF329Q86UD4 541 aa13.58□□□□□ -0.23
PACS1-201ENST00000320580 ARMS2P0C7Q2 107 aa13.58□□□□□ -0.24
PACS1-201ENST00000320580 DLX1P56177 255 aa13.58□□□□□ -0.24
PACS1-201ENST00000320580 FAM231DQ6ZW35 169 aa13.58□□□□□ -0.24
PACS1-201ENST00000320580 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.24
PACS1-201ENST00000320580 Q8N976 141 aa13.58□□□□□ -0.24
PACS1-201ENST00000320580 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 ATP5LO75964 103 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 RPL27AP46776 148 aaKnown RBP13.57□□□□□ -0.24
PACS1-201ENST00000320580 ATP5G2Q06055 141 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 ANXA2RQ3ZCQ2 193 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 UPK2O00526 184 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 PRCDQ00LT1 54 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 SPANXN1Q5VSR9 72 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 Q6AWC8 147 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 GCSAMQ8N6F7 178 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 WIPF2Q8TF74 440 aaPredicted RBP13.57□□□□□ -0.24
PACS1-201ENST00000320580 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 OBSL1O75147 1896 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 SVIPQ8NHG7 77 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 CCL13Q99616 98 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 ZNF747Q9BV97 191 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 TRGV8A0A0C4DH27 118 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 SAA2P0DJI9 122 aaPredicted RBP13.57□□□□□ -0.24
PACS1-201ENST00000320580 MEOX1P50221 254 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 DLX4Q92988 240 aaPredicted RBP13.57□□□□□ -0.24
PACS1-201ENST00000320580 PGPEP1Q9NXJ5 209 aa13.57□□□□□ -0.24
PACS1-201ENST00000320580 KLF17Q5JT82 389 aaPredicted RBP13.56□□□□□ -0.24
PACS1-201ENST00000320580 NUP210Q8TEM1 1887 aaPredicted RBP13.56□□□□□ -0.24
PACS1-201ENST00000320580 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 LOXL3P58215 753 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 RAXQ9Y2V3 346 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 TCRBV4S1A1TA0A5B7 111 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 NRN1LQ496H8 165 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 ASCL2Q99929 193 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 ZNF256Q9Y2P7 627 aaPredicted RBP13.56□□□□□ -0.24
PACS1-201ENST00000320580 C2orf16Q68DN1 1984 aa13.56□□□□□ -0.24
PACS1-201ENST00000320580 SMKR1H3BMG3 65 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 TCRAP04437 139 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 SAA1P0DJI8 122 aaPredicted RBP13.55□□□□□ -0.24
PACS1-201ENST00000320580 EVI2AP22794 236 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 CFHR2P36980 270 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 TNFAIP6P98066 277 aaPredicted RBP13.55□□□□□ -0.24
PACS1-201ENST00000320580 SLC25A45Q8N413 288 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 TMEM178AQ8NBL3 297 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 AMN1Q8IY45 258 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 METRNQ9UJH8 293 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 ZFHX2Q9C0A1 2572 aaPredicted RBP13.55□□□□□ -0.24
PACS1-201ENST00000320580 BPTFQ12830 3046 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 CITED1Q99966 193 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 J3KRW8 73 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 COX6A1P12074 109 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 SMIM20Q8N5G0 67 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 UBTD1Q9HAC8 227 aa13.55□□□□□ -0.24
PACS1-201ENST00000320580 MED12LQ86YW9 2145 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 TNFRSF1AP19438 455 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 CFHR1Q03591 330 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
PACS1-201ENST00000320580 CDH23Q9H251 3354 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 K7EMI3 77 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 LGALS7P47929 136 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 KIAA1549Q9HCM3 1950 aa13.54□□□□□ -0.24
PACS1-201ENST00000320580 A0A0C4DFX4 3053 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 CHD9Q3L8U1 2897 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 IGLV3-12A0A075B6K2 115 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 C1RLQ9NZP8 487 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 GAGE5Q13069 117 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 GAGE6Q13070 117 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 LGALS9BQ3B8N2 356 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 LGALS9CQ6DKI2 356 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 PROCRQ9UNN8 238 aa13.53□□□□□ -0.24
PACS1-201ENST00000320580 MGPP08493 103 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms