RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 SPSB3Q6PJ21 355 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 ZNF329Q86UD4 541 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 SFRP2Q96HF1 295 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 JMJD8Q96S16 334 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 IGHV4-61A0A0C4DH41 118 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 PEX7O00628 323 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 SIAH2O43255 324 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 IGHV2-5P01817 119 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 PLA2G5P39877 138 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 RPL23P62829 140 aaKnown RBP7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 GOLT1BQ9Y3E0 138 aa7.48□□□□□ -1.21
TMEM39A-201ENST00000319172 REV3LO60673 3130 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 TRAV41A0A0B4J266 112 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 PROP1O75360 226 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 HLA-DRB1P01911 266 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 KRTDAPP60985 99 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 PMS2P11Q13670 270 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 Q5PR19 223 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 SPANXN1Q5VSR9 72 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 DERL1Q9BUN8 251 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 SCRT1Q9BWW7 348 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 PRSS22Q9GZN4 317 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 TBL2Q9Y4P3 447 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 FN1P02751 2386 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 Q9H3A6 140 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 A0A087X0M5 115 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 A0A1B0GX30 115 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 SLC25A16P16260 332 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 DAZAP2Q15038 168 aaPredicted RBP7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 TUBA4BQ9H853 241 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 CPAMD8Q8IZJ3 1885 aa7.47□□□□□ -1.21
TMEM39A-201ENST00000319172 MTORP42345 2549 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 A8MWL6 223 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 G3V318 75 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 TSTD3H0UI37 97 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 MGPP08493 103 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 RITA1Q96K30 269 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 NOL4LQ96MY1 436 aaPredicted RBP7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 ZNF586Q9NXT0 402 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 CFAP54Q96N23 3096 aa7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 TNRC6BQ9UPQ9 1833 aaKnown RBP7.46□□□□□ -1.21
TMEM39A-201ENST00000319172 ZNF562Q6V9R5 426 aa7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 C8orf46Q8TAG6 207 aa7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 IGHV4-30-2A0A087WSY4 118 aa7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 RPL15P61313 204 aaKnown RBP7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 RRN3P1Q2M238 152 aa7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 PVRIGQ6DKI7 326 aa7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 Q71RC1 249 aaPredicted RBP7.46□□□□□ -1.22
TMEM39A-201ENST00000319172 IGHV1-69DA0A0B4J2H0 117 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 PMS2P5A8MQ11 134 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 PHOX2AO14813 284 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 IGHV1-69P01742 117 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 LINC00614P0C842 121 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 TCF23Q7RTU1 214 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 LINC01356Q8N9X3 169 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 AMTP48728 403 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 OCC1Q8TAD7 63 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 ATP6V0E1O15342 81 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 GGCTO75223 188 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 ZFP36P26651 326 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 ZNF726P1Q15940 193 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 FAM120AOSQ5T036 256 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 DTX2Q86UW9 622 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 Q96MF0 132 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 TMEM189A5PLL7 270 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 CXorf65A6NEN9 183 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 PSG9Q00887 426 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 POU2AF1Q16633 256 aa7.45□□□□□ -1.22
TMEM39A-201ENST00000319172 CBLN1P23435 193 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 ODF3L1Q8IXM7 274 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 EXOC3-AS1Q8N2X6 119 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 ELOVL1Q9BW60 279 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 MUC21A0A0G2JKD1 596 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 MUC21A0A140T8X8 626 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 A0A1W2PRE2 83 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 CGB3P0DN86 165 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 CGB7P0DN87 165 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 RAB9AP51151 201 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 HIST1H1AQ02539 215 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 MUC21Q5SSG8 566 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 FAM162BQ5T6X4 162 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 RAX2Q96IS3 184 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 TRGV9Q99603 122 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 SLC25A39Q9BZJ4 359 aaPredicted RBP7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 TCAPO15273 167 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 RIGQ13278 110 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 ARL2-SNX15V9GYD0 113 aa7.44□□□□□ -1.22
TMEM39A-201ENST00000319172 NDUFB8O95169 186 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 APCSP02743 223 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 BRWD1-AS2P59051 145 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 SRD5A1P18405 259 aa7.43□□□□□ -1.22
TMEM39A-201ENST00000319172 PRRC2AP48634 2157 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms