RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 FAM181BA6NEQ2 426 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 PGPEP1LA6NFU8 196 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 BMPR1BO00238 502 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 MYOD1P15172 320 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 NPY1RP25929 384 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 RPS16P62249 146 aaKnown RBP10.5□□□□□ -0.73
CPNE1-201ENST00000317677 UBE2G1P62253 170 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 V9GYV3 84 aa10.5□□□□□ -0.73
CPNE1-201ENST00000317677 LOC102724200A0A096LPH7 203 aaPredicted RBP10.49□□□□□ -0.73
CPNE1-201ENST00000317677 C2orf70A6NJV1 201 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 C22orf46C9J442 243 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 CRYBB3P26998 211 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 C8orf46Q8TAG6 207 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 NPCDR1Q9BY65 106 aa10.49□□□□□ -0.73
CPNE1-201ENST00000317677 RBMXL2O75526 392 aaKnown RBP10.48□□□□□ -0.73
CPNE1-201ENST00000317677 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-201ENST00000317677 ZNF137PP52743 207 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 ERVK-16P61578 105 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 KLF5Q13887 457 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-201ENST00000317677 PDLIM3Q53GG5 364 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-201ENST00000317677 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 ERASQ7Z444 233 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 C11orf52Q96A22 123 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 NABP2Q9BQ15 211 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 C15orf61A6NNL5 157 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 C15orf62A8K5M9 175 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 K7EN84 100 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 SLC17A3O00476 420 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 AMY1AP04745 511 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 SRIP30626 198 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 SEC11AP67812 179 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 RASL11AQ6T310 242 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 ABHD12Q8N2K0 398 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 FAM19A2Q8N3H0 131 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 LY6G5BQ8NDX9 201 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 OR5AN1Q8NGI8 311 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 OR9G1Q8NH87 305 aa10.48□□□□□ -0.73
CPNE1-201ENST00000317677 PPIAL4CA0A0B4J2A2 164 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 HIST1H1AQ02539 215 aaPredicted RBP10.47□□□□□ -0.73
CPNE1-201ENST00000317677 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 OR1N2Q8NGR9 330 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 OR10X1Q8NGY0 326 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 OR52E5Q8NH55 327 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 OR4A16Q8NH70 328 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 TNCP24821 2201 aa10.47□□□□□ -0.73
CPNE1-201ENST00000317677 MT-CO2P00403 227 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 IGLV1-47P01700 117 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 Q56UQ5 140 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 Q8N7P7 452 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 C18orf32Q8TCD1 76 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 WIPF2Q8TF74 440 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-201ENST00000317677 SIGMAR1Q99720 223 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-201ENST00000317677 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 OSTCQ9NRP0 149 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 TMEM14BQ9NUH8 114 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 APCP25054 2843 aa10.46□□□□□ -0.73
CPNE1-201ENST00000317677 NTF3P20783 257 aa10.46□□□□□ -0.74
CPNE1-201ENST00000317677 FAM162BQ5T6X4 162 aa10.46□□□□□ -0.74
CPNE1-201ENST00000317677 OR10W1Q8NGF6 305 aa10.46□□□□□ -0.74
CPNE1-201ENST00000317677 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.74
CPNE1-201ENST00000317677 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.74
CPNE1-201ENST00000317677 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.74
CPNE1-201ENST00000317677 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.74
CPNE1-201ENST00000317677 FOXA2Q9Y261 457 aaPredicted RBP10.46□□□□□ -0.74
CPNE1-201ENST00000317677 TACC2O95359 2948 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 UPK2O00526 184 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 APCSP02743 223 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 SAA1P0DJI8 122 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-201ENST00000317677 TNXAQ16473 311 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 RTL8BQ17RB0 113 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 TMEM177Q53S58 311 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 IGFBPL1Q8WX77 278 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 TIMD4Q96H15 378 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 RITA1Q96K30 269 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 C7orf71A4D174 169 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 PRSS46E5RG02 174 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 K7EP34 96 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 RRHO14718 337 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 GNG7O60262 68 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 HSBP1O75506 76 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 CXorf1O96002 111 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 KIAA1644Q3SXP7 199 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 NPVFQ9HCQ7 196 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
CPNE1-201ENST00000317677 A0A1W2PPV4 95 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms