RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SAXO1Q8IYX7 474 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 RPUSD1Q9UJJ7 312 aaKnown RBP7.28□□□□□ -1.24
USF3-201ENST00000316407 NUP210Q8TEM1 1887 aaPredicted RBP7.28□□□□□ -1.24
USF3-201ENST00000316407 KIAA1549LQ6ZVL6 1849 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 IGHV1OR15-9A0A0B4J2B8 117 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 Q6ZVH6 145 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 Q8TAT8 98 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 A0A0A6YYD4 124 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 TCRAP04437 139 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 HGFACQ04756 655 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 IMMP1LQ96LU5 166 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 IGKV1D-43A0A0B4J1Z2 117 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 MORN5Q5VZ52 161 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 TMEM158Q8WZ71 300 aa7.28□□□□□ -1.24
USF3-201ENST00000316407 JPT1Q9UK76 154 aa7.27□□□□□ -1.24
USF3-201ENST00000316407 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 SMAD7O15105 426 aaKnown RBP7.27□□□□□ -1.25
USF3-201ENST00000316407 PDLIM4P50479 330 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 ZSWIM8A7E2V4 1837 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 SPXQ9BT56 116 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 CCL21O00585 134 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 TNS1Q9HBL0 1735 aaKnown RBP7.27□□□□□ -1.25
USF3-201ENST00000316407 TDHQ8IZJ6 230 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 CD160O95971 181 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 TRIP6Q15654 476 aaKnown RBP7.27□□□□□ -1.25
USF3-201ENST00000316407 OR9G1Q8NH87 305 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 OTOGLQ3ZCN5 2332 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 TRBV24-1A0A075B6N3 115 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 SLC22A18ASQ8N1D0 253 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 INS-IGF2F8WCM5 200 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 INSP01308 110 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 FAM214BQ7L5A3 538 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 OR9G9P0C7N8 305 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 CEACAM8P31997 349 aaPredicted RBP7.27□□□□□ -1.25
USF3-201ENST00000316407 PPP1R27Q86WC6 154 aa7.27□□□□□ -1.25
USF3-201ENST00000316407 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 MRPL23Q16540 153 aaKnown RBP7.26□□□□□ -1.25
USF3-201ENST00000316407 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.26□□□□□ -1.25
USF3-201ENST00000316407 PRADC1Q9BSG0 188 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 GAGE12JA6NER3 117 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 PATE3B3GLJ2 98 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 MST1P26927 711 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 GAGE4Q13068 117 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 GAGE5Q13069 117 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 GAGE6Q13070 117 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 IGHV1-45A0A0A0MS14 117 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 SLC25A48Q6ZT89 311 aaKnown RBP7.26□□□□□ -1.25
USF3-201ENST00000316407 Q6ZWC4 215 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 A0A1W2PR77 199 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 TM2D1Q9BX74 207 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 C15orf61A6NNL5 157 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 TMEM126AQ9H061 195 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 IGHMP01871 453 aa7.26□□□□□ -1.25
USF3-201ENST00000316407 C3orf56Q8N813 242 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 ZNF415Q09FC8 603 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 MORN3Q6PF18 240 aaPredicted RBP7.25□□□□□ -1.25
USF3-201ENST00000316407 CYTL1Q9NRR1 136 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 TRAV40A0A0B4J280 105 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 TANC1Q9C0D5 1861 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 PF4P02776 101 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CELA3AP09093 270 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 ZNF688P0C7X2 276 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 SUPT4H1P63272 117 aaKnown RBP7.25□□□□□ -1.25
USF3-201ENST00000316407 COL5A3P25940 1745 aaPredicted RBP7.25□□□□□ -1.25
USF3-201ENST00000316407 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CCL25O15444 150 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 FHL5Q5TD97 284 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 ZNF703Q9H7S9 590 aaPredicted RBP7.25□□□□□ -1.25
USF3-201ENST00000316407 C19orf48Q6RUI8 117 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 RASL11AQ6T310 242 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CENPVQ7Z7K6 275 aaPredicted RBP7.25□□□□□ -1.25
USF3-201ENST00000316407 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 LOC102723996A0A087X1L8 192 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 DPH3P1Q9H4G8 78 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 FABP5P3A8MUU1 101 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CD5LO43866 347 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 GFI1Q99684 422 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 FAM216BQ8N7L0 139 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CHCHD5Q9BSY4 110 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 NLRC5Q86WI3 1866 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 F2Z2F3 143 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 CDK2AP2O75956 126 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 PAX1P15863 534 aa7.25□□□□□ -1.25
USF3-201ENST00000316407 NUP210LQ5VU65 1888 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 AGMATQ9BSE5 352 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 IGKV1D-8A0A087WSZ0 117 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 CXorf51AA0A1B0GTR3 108 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 CFHR2P36980 270 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 CLPSL1A2RUU4 121 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
USF3-201ENST00000316407 C1QTNF4Q9BXJ3 329 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 A0A1W2PPM0 123 aa7.24□□□□□ -1.25
USF3-201ENST00000316407 K7EP34 96 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms