RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PPIAL4DF5H284 164 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 PPIAL4FP0DN26 164 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 HIST1H1EP10412 219 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 LDLRAD2Q5SZI1 272 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 TEX36Q5VZQ5 186 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 TCF24Q7RTU0 167 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 PAXXQ9BUH6 204 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 ST20Q9HBF5 79 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 OR2T8A6NH00 312 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 SSBP2P81877 361 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 SVEP1Q4LDE5 3571 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 COX7A2P2O60397 106 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 PSG1P11464 419 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF841Q6ZN19 808 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 ADTRPQ96IZ2 230 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 CHRDL1Q9BU40 450 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 IGHV1-24A0A0C4DH33 117 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 CBY3A6NI87 242 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 B9A039 149 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 CGB3P0DN86 165 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 CGB7P0DN87 165 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 RHOGP84095 191 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 BVES-AS1Q5T3Y7 98 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 VPS25Q9BRG1 176 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
SCAMP4-201ENST00000316097 MUC21A0A0G2JKD1 596 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 MUC21A0A140T8X8 626 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 MUC21Q5SSG8 566 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 GSX1Q9H4S2 264 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 SLC25A34Q6PIV7 304 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 OR1L8Q8NGR8 309 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 CST9LQ9H4G1 147 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 RPH3ALQ9UNE2 315 aa13.78□□□□□ -0.2
SCAMP4-201ENST00000316097 KBTBD11-OT1A0A1B0GTJ5 212 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 LEPROTL1O95214 131 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 IGHV3-48P01763 117 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 PPBPP02775 128 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 CCL3L1P16619 93 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 HBBP68871 147 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 C10orf113Q5VZT2 155 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 H1FXQ92522 213 aaKnown RBP13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 C7orf69Q9H7B7 122 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 CTSZQ9UBR2 303 aa13.77□□□□□ -0.2
SCAMP4-201ENST00000316097 A0A1W2PPR1 153 aa13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 CRXO43186 299 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 SAA1P0DJI8 122 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 MCRIP2Q9BUT9 160 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 C19orf84I3L1E1 186 aa13.77□□□□□ -0.21
SCAMP4-201ENST00000316097 FLNCQ14315 2725 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 H0Y8G0 127 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 CT45A6P0DMU7 189 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 CT45A5P0DMU8 189 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 CT45A7P0DMV0 189 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 FAM162BQ5T6X4 162 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 AMMECR1LQ6DCA0 310 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 DEFB125Q8N687 156 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 AKAP6Q13023 2319 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 HSBP1L1C9JCN9 74 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 PRB3Q04118 309 aaPredicted RBP13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 OCIAD2Q56VL3 154 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 FXYD5Q96DB9 178 aa13.76□□□□□ -0.21
SCAMP4-201ENST00000316097 PRB1P04280 392 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 SLC25A5P05141 298 aaKnown RBP13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 ZNF137PP52743 207 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 BLNKQ8WV28 456 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 TMEM191AQ9H0A3 160 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 C1RLQ9NZP8 487 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 DLX1P56177 255 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 LINC00322Q6ZN03 302 aaPredicted RBP13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 PGLYRP4Q96LB8 373 aa13.75□□□□□ -0.21
SCAMP4-201ENST00000316097 C12orf54Q6X4T0 127 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 OR1L4Q8NGR5 311 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 CACNG8Q8WXS5 425 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 CHCHD1Q96BP2 118 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 RPP21Q9H633 154 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 RAB9BQ9NP90 201 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 BPIFB3P59826 476 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 TMEM200BQ69YZ2 307 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 GTSF1Q8WW33 167 aa13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 TIMM8BQ9Y5J9 83 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 UTP20O75691 2785 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-201ENST00000316097 DSCAML1Q8TD84 2053 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 TNFRSF13BO14836 293 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 ZNF138P52744 262 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 ERHP84090 104 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 ZNF430Q9H8G1 570 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-201ENST00000316097 EPDR1Q9UM22 224 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms