RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 H3BTX0 84 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 SAP30O75446 220 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 OR10X1Q8NGY0 326 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 SLC25A17O43808 307 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 LTAP01374 205 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 P01737 135 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
SKA3-202ENST00000314759 MEF2CQ06413 473 aaPredicted RBP10.77□□□□□ -0.69
SKA3-202ENST00000314759 HCP5Q6MZN7 132 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 FAM215AQ9Y5M1 114 aa10.77□□□□□ -0.69
SKA3-202ENST00000314759 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 FAM162BQ5T6X4 162 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 CHCHD1Q96BP2 118 aaKnown RBP10.76□□□□□ -0.69
SKA3-202ENST00000314759 C1RLQ9NZP8 487 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 FAM27E3Q08E93 113 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 CT83Q5H943 113 aa10.76□□□□□ -0.69
SKA3-202ENST00000314759 TOX4O94842 621 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 CRYGCP07315 174 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 FAM87AP0C7U9 286 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 RIPPLY3P57055 190 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 C5orf17Q8NAS9 161 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 FMC1Q96HJ9 113 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 CD5LO43866 347 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 TCRAP04437 139 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 GP9P14770 177 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 CD40P25942 277 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 RBPMS2Q6ZRY4 209 aaKnown RBP10.75□□□□□ -0.69
SKA3-202ENST00000314759 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
SKA3-202ENST00000314759 SOX21Q9Y651 276 aaPredicted RBP10.75□□□□□ -0.69
SKA3-202ENST00000314759 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 HSBP1L1C9JCN9 74 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 TMEM186Q96B77 213 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 MEGF9Q9H1U4 602 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 Q9H3A6 140 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 APELAP0DMC3 54 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 DEFB109BQ30KR1 87 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 CSN3P07498 182 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 GPR183P32249 361 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 FAM71F2Q6NXP2 309 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 Q71RC1 249 aaPredicted RBP10.74□□□□□ -0.69
SKA3-202ENST00000314759 H1FXQ92522 213 aaKnown RBP10.74□□□□□ -0.69
SKA3-202ENST00000314759 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
SKA3-202ENST00000314759 TRGV9Q99603 122 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
SKA3-202ENST00000314759 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
SKA3-202ENST00000314759 TRAV8-1A0A0A6YYK1 113 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 VMA21Q3ZAQ7 101 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 BDP1A6H8Y1 2624 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 PPIAL4DF5H284 164 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 CEP250Q9BV73 2442 aa10.73□□□□□ -0.69
SKA3-202ENST00000314759 IGHV3-72A0A0B4J1Y9 119 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 C7orf71A4D174 169 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 NPIPB6E9PJ23 425 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 TNFRSF1AP19438 455 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 HIST1H1AQ02539 215 aaPredicted RBP10.72□□□□□ -0.69
SKA3-202ENST00000314759 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 CIARTQ8N365 385 aaPredicted RBP10.72□□□□□ -0.69
SKA3-202ENST00000314759 TMEM116Q8NCL8 245 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 NAA38Q9BRA0 125 aaKnown RBP10.72□□□□□ -0.69
SKA3-202ENST00000314759 FAM231BA6NCW3 169 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 K7ERU9 68 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 CHEK1O14757 476 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 KLK10O43240 276 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 APOHP02749 345 aaPredicted RBP10.72□□□□□ -0.69
SKA3-202ENST00000314759 UQCRFS1P47985 274 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 LYPD2Q6UXB3 125 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 LINC00311Q8N616 119 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 C8orf46Q8TAG6 207 aa10.72□□□□□ -0.69
SKA3-202ENST00000314759 OVOL3O00110 214 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 ENSAO43768 121 aaKnown RBP10.71□□□□□ -0.69
SKA3-202ENST00000314759 NCR2O95944 276 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 LIPFP07098 398 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 COL8A1P27658 744 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 ARF6P62330 175 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 DEFB123Q8N688 67 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.69
SKA3-202ENST00000314759 C17orf100A8MU93 164 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 PET117Q6UWS5 81 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 Q86TA4 180 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 WFDC8Q8IUA0 241 aa10.71□□□□□ -0.69
SKA3-202ENST00000314759 HAX1O00165 279 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 IGLV2-11P01706 119 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 HLA-DRB1P01911 266 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 OR5AL1P0C617 328 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 TCTAP57738 103 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 C1orf185Q5T7R7 199 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 C8orf31Q8N9H6 132 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 NUP37Q8NFH4 326 aa10.71□□□□□ -0.7
SKA3-202ENST00000314759 PKDREJQ9NTG1 2253 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms