RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
CLCN6-201ENST00000312413 LYL1P12980 280 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 SRRM5B3KS81 715 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 ZNF138P52744 262 aa11.25□□□□□ -0.61
CLCN6-201ENST00000312413 SH2D1AO60880 128 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 RPL15P61313 204 aaKnown RBP11.24□□□□□ -0.61
CLCN6-201ENST00000312413 RASL10AQ92737 203 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
CLCN6-201ENST00000312413 LAMTOR3Q9UHA4 124 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 IGHV1-18A0A0C4DH31 117 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 ZNF883P0CG24 379 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 NTF4P34130 210 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 IGLV3-19P01714 112 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 FLVCR1-AS1Q8TAF5 88 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-201ENST00000312413 EP300Q09472 2414 aaPredicted RBP11.24□□□□□ -0.61
CLCN6-201ENST00000312413 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 NABP1Q96AH0 204 aa11.24□□□□□ -0.61
CLCN6-201ENST00000312413 PSPNO60542 156 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 Q0VG73 95 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
CLCN6-201ENST00000312413 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 MLNRO43193 412 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
CLCN6-201ENST00000312413 C9JAW5 83 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 SRD5A1P18405 259 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 CDKN1AP38936 164 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
CLCN6-201ENST00000312413 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-201ENST00000312413 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
CLCN6-201ENST00000312413 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 ZNF474Q6S9Z5 364 aaPredicted RBP11.22□□□□□ -0.61
CLCN6-201ENST00000312413 C9orf139Q6ZV77 190 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 AMN1Q8IY45 258 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 CSTL1Q9H114 145 aa11.22□□□□□ -0.61
CLCN6-201ENST00000312413 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 Q8TAT8 98 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 RCHY1Q96PM5 261 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.61
CLCN6-201ENST00000312413 DNAJC30Q96LL9 226 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
CLCN6-201ENST00000312413 C15orf62A8K5M9 175 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 LYNX1G3V0Z9 82 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 EFNA2O43921 213 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 LYNX1P0DP58 116 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.62
CLCN6-201ENST00000312413 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.62
CLCN6-201ENST00000312413 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.62
CLCN6-201ENST00000312413 KLF12Q9Y4X4 402 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.62
CLCN6-201ENST00000312413 WNT2P09544 360 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 SELLP14151 372 aa11.21□□□□□ -0.62
CLCN6-201ENST00000312413 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 VWC2LB2RUY7 222 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 QRFPP83859 136 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 RNF5Q99942 180 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 INTS1Q8N201 2190 aaKnown RBP11.2□□□□□ -0.62
CLCN6-201ENST00000312413 MYOFQ9NZM1 2061 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 C14orf178Q8N769 122 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-201ENST00000312413 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 GFRA4Q9GZZ7 299 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 COLQQ9Y215 455 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-201ENST00000312413 A0A087WX48 190 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 LEPROTO15243 131 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 MST1LQ2TV78 715 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 GAGE2AQ6NT46 116 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 STPG4Q8N801 248 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
CLCN6-201ENST00000312413 THBDP07204 575 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 FOXG1P55316 489 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-201ENST00000312413 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 LINC00473A8K010 186 aa11.19□□□□□ -0.62
CLCN6-201ENST00000312413 IGHV1-8P0DP01 117 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms