RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 SPATA45Q537H7 98 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 PPP1R27Q86WC6 154 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 EXOC3-AS1Q8N2X6 119 aa20.19■□□□□ 0.82
HOXB3-201ENST00000311626 RNASEKQ6P5S7 137 aaKnown RBP20.18■□□□□ 0.82
HOXB3-201ENST00000311626 PGLYRP4Q96LB8 373 aa20.18■□□□□ 0.82
HOXB3-201ENST00000311626 FAM90A27PA6NNH2 459 aa20.18■□□□□ 0.82
HOXB3-201ENST00000311626 LDLRAD2Q5SZI1 272 aa20.18■□□□□ 0.82
HOXB3-201ENST00000311626 TMEM116Q8NCL8 245 aa20.18■□□□□ 0.82
HOXB3-201ENST00000311626 C22orf15Q8WYQ4 148 aa20.18■□□□□ 0.82
HOXB3-201ENST00000311626 A0A1W2PRD5 423 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 A0A1W2PRF3 423 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 A0A1W2PRM7 423 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 HIST1H1EP10412 219 aaKnown RBP20.17■□□□□ 0.82
HOXB3-201ENST00000311626 ZNF25P17030 456 aaPredicted RBP20.17■□□□□ 0.82
HOXB3-201ENST00000311626 FOXA3P55318 350 aaPredicted RBP20.17■□□□□ 0.82
HOXB3-201ENST00000311626 PMCHL1Q16048 86 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 SH2D7A6NKC9 451 aaPredicted RBP20.17■□□□□ 0.82
HOXB3-201ENST00000311626 CD3EP07766 207 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 PRRX1P54821 245 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 GPR82Q96P67 336 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 CLEC7AQ9BXN2 247 aa20.17■□□□□ 0.82
HOXB3-201ENST00000311626 PPIAL4CA0A0B4J2A2 164 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 PPIAL4GP0DN37 164 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 CASP6P55212 293 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 FOXC1Q12948 553 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 RPEQ96AT9 228 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 NGBQ9NPG2 151 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 ONECUT1Q9UBC0 465 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 F11RQ9Y624 299 aaKnown RBP20.16■□□□□ 0.82
HOXB3-201ENST00000311626 CIARTQ8N365 385 aaPredicted RBP20.16■□□□□ 0.82
HOXB3-201ENST00000311626 GTSF1Q8WW33 167 aa20.16■□□□□ 0.82
HOXB3-201ENST00000311626 SRSF12Q8WXF0 261 aaKnown RBP20.16■□□□□ 0.82
HOXB3-201ENST00000311626 TFPI2P48307 235 aa20.15■□□□□ 0.82
HOXB3-201ENST00000311626 C17orf77Q96MU5 243 aa20.15■□□□□ 0.82
HOXB3-201ENST00000311626 ALKBH7Q9BT30 221 aaPredicted RBP20.15■□□□□ 0.82
HOXB3-201ENST00000311626 WIPF2Q8TF74 440 aaPredicted RBP20.15■□□□□ 0.82
HOXB3-201ENST00000311626 BORCS7Q96B45 105 aa20.15■□□□□ 0.82
HOXB3-201ENST00000311626 PTPRQQ9UMZ3 2332 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 HSBP1O75506 76 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 TCRAP04437 139 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 C8orf46Q8TAG6 207 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 HIGD1AQ9Y241 93 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 HILPDAQ9Y5L2 63 aa20.14■□□□□ 0.82
HOXB3-201ENST00000311626 KLF17Q5JT82 389 aaPredicted RBP20.14■□□□□ 0.81
HOXB3-201ENST00000311626 CYB5R2Q6BCY4 276 aa20.14■□□□□ 0.81
HOXB3-201ENST00000311626 STXBP6Q8NFX7 210 aa20.14■□□□□ 0.81
HOXB3-201ENST00000311626 MLST8Q9BVC4 326 aa20.14■□□□□ 0.81
HOXB3-201ENST00000311626 ASH1LQ9NR48 2969 aaKnown RBP20.13■□□□□ 0.81
HOXB3-201ENST00000311626 SIAH2O43255 324 aa20.13■□□□□ 0.81
HOXB3-201ENST00000311626 CNIH1O95406 144 aa20.13■□□□□ 0.81
HOXB3-201ENST00000311626 RPP21Q9H633 154 aaKnown RBP20.13■□□□□ 0.81
HOXB3-201ENST00000311626 KLF12Q9Y4X4 402 aa20.13■□□□□ 0.81
HOXB3-201ENST00000311626 IGLC1P0CG04 106 aa20.13■□□□□ 0.81
HOXB3-201ENST00000311626 FBLN7Q53RD9 439 aa20.13■□□□□ 0.81
HOXB3-201ENST00000311626 MED13LQ71F56 2210 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 B9A039 149 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 M0R2Z0 102 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 CTRLP40313 264 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 PVRIGQ6DKI7 326 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 EBLN2Q6P2I7 272 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 GOLT1AQ6ZVE7 132 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 PRNTQ86SH4 94 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 MUC15Q8N387 334 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 C5orf17Q8NAS9 161 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 OR4B1Q8NGF8 309 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 CLEC5AQ9NY25 188 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 ANKHD1Q8IWZ3 2542 aaKnown RBP20.12■□□□□ 0.81
HOXB3-201ENST00000311626 P01737 135 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 MMDQ15546 238 aa20.12■□□□□ 0.81
HOXB3-201ENST00000311626 SLC25A39Q9BZJ4 359 aaPredicted RBP20.12■□□□□ 0.81
HOXB3-201ENST00000311626 TIMM23O14925 209 aa20.11■□□□□ 0.81
HOXB3-201ENST00000311626 Q56UQ5 140 aa20.11■□□□□ 0.81
HOXB3-201ENST00000311626 TOMM40O96008 361 aa20.11■□□□□ 0.81
HOXB3-201ENST00000311626 RPLP1P05386 114 aaKnown RBP20.1■□□□□ 0.81
HOXB3-201ENST00000311626 ARF6P62330 175 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 SSX8Q7RTT4 187 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 URB1-AS1Q96HZ7 61 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 A0A1B0GXF2 115 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 I3L2K1 104 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 LTAP01374 205 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 KLRD1Q13241 179 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 SPATA12Q7Z6I5 190 aa20.1■□□□□ 0.81
HOXB3-201ENST00000311626 BCL6BQ8N143 479 aaPredicted RBP20.1■□□□□ 0.81
HOXB3-201ENST00000311626 RASL11BQ9BPW5 248 aa20.09■□□□□ 0.81
HOXB3-201ENST00000311626 CDSNQ15517 529 aa20.09■□□□□ 0.81
HOXB3-201ENST00000311626 DAZAP1Q96EP5 407 aaKnown RBP20.09■□□□□ 0.81
HOXB3-201ENST00000311626 FAM181BA6NEQ2 426 aa20.08■□□□□ 0.81
HOXB3-201ENST00000311626 IGKV1-17P01599 117 aa20.08■□□□□ 0.81
HOXB3-201ENST00000311626 MRPL27Q9P0M9 148 aaKnown RBP20.08■□□□□ 0.81
HOXB3-201ENST00000311626 ATRXP46100 2492 aa20.08■□□□□ 0.81
HOXB3-201ENST00000311626 ZNF124Q15973 351 aa20.08■□□□□ 0.8
HOXB3-201ENST00000311626 ZNF672Q499Z4 452 aaPredicted RBP20.08■□□□□ 0.8
HOXB3-201ENST00000311626 RASL11AQ6T310 242 aa20.08■□□□□ 0.8
HOXB3-201ENST00000311626 FMC1Q96HJ9 113 aa20.08■□□□□ 0.8
HOXB3-201ENST00000311626 PRSS22Q9GZN4 317 aa20.08■□□□□ 0.8
HOXB3-201ENST00000311626 C19orf71A6NCJ1 209 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 HBBP68871 147 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 TXN2Q99757 166 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 CHRDL1Q9BU40 450 aa20.07■□□□□ 0.8
HOXB3-201ENST00000311626 CA7P43166 264 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms