RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 RPUSD1Q9UJJ7 312 aaKnown RBP10.86□□□□□ -0.67
SNED1-201ENST00000310397 CEP192Q8TEP8 1941 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 C9orf172C9J069 976 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 OR10W1Q8NGF6 305 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 S4R3C0 116 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 SLC25A39Q9BZJ4 359 aaPredicted RBP10.86□□□□□ -0.67
SNED1-201ENST00000310397 KIAA1671Q9BY89 1806 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 MYOD1P15172 320 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 C9orf106Q8NAJ2 232 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 PRR19A6NJB7 356 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 ZFAND6Q6FIF0 208 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 FAM57AQ8TBR7 257 aa10.86□□□□□ -0.67
SNED1-201ENST00000310397 ESDP10768 282 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 IGHV2-5P01817 119 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 HGFACQ04756 655 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 D6R8Y8 96 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 CD5LO43866 347 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 LY6EQ16553 131 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 GPR179Q6PRD1 2367 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 C15orf62A8K5M9 175 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 SP9P0CG40 484 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 LCN12Q6JVE5 192 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 BCL6BQ8N143 479 aaPredicted RBP10.85□□□□□ -0.67
SNED1-201ENST00000310397 GFRA4Q9GZZ7 299 aa10.85□□□□□ -0.67
SNED1-201ENST00000310397 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 PSPNO60542 156 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 RBMY1A1P0DJD3 496 aaKnown RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 RBMY1CP0DJD4 496 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 C9JQL5 133 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 CLPSP04118 112 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 NTF4P34130 210 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 KIR3DL3Q8N743 410 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 PMS2P5A8MQ11 134 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 EVI2AP22794 236 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 PAX2Q02962 417 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 MPV17L2Q567V2 206 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 CD7P09564 240 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 ATP5J2P56134 94 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 A0A087X0K7 114 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 Q6P435 159 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 C17orf82Q86X59 251 aaPredicted RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 CENPVQ7Z7K6 275 aaPredicted RBP10.84□□□□□ -0.67
SNED1-201ENST00000310397 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 RFNGQ9Y644 331 aa10.84□□□□□ -0.67
SNED1-201ENST00000310397 TMEM238C9JI98 176 aa10.83□□□□□ -0.67
SNED1-201ENST00000310397 GFRA3O60609 400 aa10.83□□□□□ -0.67
SNED1-201ENST00000310397 FHL1Q13642 323 aa10.83□□□□□ -0.67
SNED1-201ENST00000310397 MBNL3Q9NUK0 354 aaKnown RBP10.83□□□□□ -0.68
SNED1-201ENST00000310397 ZFP36L1Q07352 338 aaKnown RBP10.83□□□□□ -0.68
SNED1-201ENST00000310397 DUX3Q96PT4 197 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 SPANXA1Q9NS26 97 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 C2orf16Q68DN1 1984 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 TCRAP04437 139 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 GAGE2EQ4V326 116 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 GAGE2DQ9UEU5 116 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 ERG28Q9UKR5 140 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 PSG1P11464 419 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 DMRTA2Q96SC8 542 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 IGHV1-18A0A0C4DH31 117 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 hDV102S1A0JD36 115 aa10.83□□□□□ -0.68
SNED1-201ENST00000310397 PFN1P07737 140 aaKnown RBP10.83□□□□□ -0.68
SNED1-201ENST00000310397 TRAV5A0A0B4J249 113 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 TPTE2P1Q5T6R2 138 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
SNED1-201ENST00000310397 JMJD8Q96S16 334 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 RNF5Q99942 180 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 TRAV8-4A0A0B4J246 113 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 TMEM95Q3KNT9 176 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 SPATA31B1PQ5VZV4 182 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
SNED1-201ENST00000310397 FOXL2NBQ6ZUU3 175 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 TOMM40O96008 361 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 EXOC3-AS1Q8N2X6 119 aa10.82□□□□□ -0.68
SNED1-201ENST00000310397 RHOGP84095 191 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 GAGE1Q13065 139 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 KIR3DS1Q14943 382 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 POLR3KQ9Y2Y1 108 aaPredicted RBP10.81□□□□□ -0.68
SNED1-201ENST00000310397 IGHV4-39P01824 125 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 SPRR3Q9UBC9 169 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 THSD7BQ9C0I4 1608 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 OVOL1O14753 267 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 TGFAP01135 160 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 CFHR1Q03591 330 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
SNED1-201ENST00000310397 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms