RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CHTOPQ9Y3Y2 248 aaKnown RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CPAMD8Q8IZJ3 1885 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 VCYO14598 125 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 TOMM40O96008 361 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CXCL3P19876 107 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 MIC13Q5XKP0 118 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 TMEM200BQ69YZ2 307 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 PRSS57Q6UWY2 283 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CBLN2Q8IUK8 224 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 PIP4P2Q8N4L2 257 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 BPESC1Q9GZL8 116 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 MRPL18Q9H0U6 180 aaKnown RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CENPVL1A0A0U1RR11 272 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 FAM231BA6NCW3 169 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 PSG1P11464 419 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 FLVCR1-AS1Q8TAF5 88 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 TSKUQ8WUA8 353 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 SIGLEC9Q9Y336 463 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 LY96Q9Y6Y9 160 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CGB1A6NKQ9 187 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 MPTX1A8MV57 137 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 NTN1O95631 604 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 GATA2P23769 480 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 FBXL19-AS1Q494R0 122 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 ATP1A1-AS1Q5TC04 95 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 ZNF474Q6S9Z5 364 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 IGFL2Q6UWQ7 119 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 FAM216BQ8N7L0 139 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 IL36BQ9NZH7 164 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 C9JCJ5 164 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 SPINK2P20155 84 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CFPP27918 469 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 C9orf66Q5T8R8 295 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 LOC389332A0A1B0GUA5 103 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 RAMP3O60896 148 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 SPRED2Q7Z698 418 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 TTC9CQ8N5M4 171 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CENPFP49454 3210 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 TMEM89A2RUT3 159 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 J3KRW8 73 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 SMIM13P0DJ93 91 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CLEC9AQ6UXN8 241 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 VKORC1L1Q8N0U8 176 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 OR5AN1Q8NGI8 311 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CITED1Q99966 193 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 MIXL1Q9H2W2 232 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 RPP21Q9H633 154 aaKnown RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 CLDN16Q9Y5I7 305 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 LOC107984156A0A0G2JMH3 177 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 A0A1W2PPE3 182 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 ZNF880Q6PDB4 577 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 ARL17AQ8IVW1 177 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 C9orf62Q8N4C0 152 aa2.63□□□□□ -1.99
CLOCK-201ENST00000309964 PARD6GQ9BYG4 376 aaPredicted RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 F11RQ9Y624 299 aaKnown RBP2.63□□□□□ -1.99
CLOCK-201ENST00000309964 A0A087WV48 116 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.62□□□□□ -1.99
CLOCK-201ENST00000309964 IGHV1-69DA0A0B4J2H0 117 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 IGHV1-69P01742 117 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 TCL1AP56279 114 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 OR5A1Q8NGJ0 315 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 A0A087X0M5 115 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 A0A1B0GX30 115 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 DPRXA6NFQ7 191 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 PLA2G10O15496 165 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 BOD1L2Q8IYS8 172 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 OR2K2Q8NGT1 345 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 OR13C6PQ8NH95 151 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 NABP1Q96AH0 204 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 SPXQ9BT56 116 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 SLC25A39Q9BZJ4 359 aaPredicted RBP2.62□□□□□ -1.99
CLOCK-201ENST00000309964 JPT2Q9H910 190 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 EPDR1Q9UM22 224 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 MTORP42345 2549 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 JMJD1CQ15652 2540 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 MEX3AA1L020 520 aaKnown RBP2.62□□□□□ -1.99
CLOCK-201ENST00000309964 ZNF98A6NK75 572 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 H3BVH4 76 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 HBDP02042 147 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 CELA3AP09093 270 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 FOXE3Q13461 319 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 FOXL2NBQ6ZUU3 175 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 Q6ZWC4 215 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 CHCHD5Q9BSY4 110 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 GFRA4Q9GZZ7 299 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 VPREB3Q9UKI3 123 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 TMSB15BA0A087X1C1 80 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 TRAV1-1A0A0B4J248 108 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 LINC01619G3V211 115 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 NDUFA4O00483 81 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 REG1AP05451 166 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 ZNF79Q15937 498 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 DEFB113Q30KQ7 82 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 DMRTA1Q5VZB9 504 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 DMRTC2Q8IXT2 367 aaPredicted RBP2.62□□□□□ -1.99
CLOCK-201ENST00000309964 OR11H7Q8NGC8 314 aa2.62□□□□□ -1.99
CLOCK-201ENST00000309964 HOXD3P31249 432 aaPredicted RBP2.62□□□□□ -1.99
CLOCK-201ENST00000309964 RPL39P5Q59GN2 51 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms