RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 HERV-K104P61576 105 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 RUNX1Q01196 453 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 GAGE2BQ13066 116 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 KLF9Q13886 244 aaPredicted RBP6.48□□□□□ -1.37
CHD6-201ENST00000309279 GAGE2EQ4V326 116 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 PYY3Q5JQD4 70 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 GSG1LQ6UXU4 331 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 ZNF66Q6ZN08 573 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 ZNF818PQ6ZRF7 136 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 PDPNQ86YL7 162 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 MMD2Q8IY49 270 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 TOMM5Q8N4H5 51 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 OR4C16Q8NGL9 310 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 S100ZQ8WXG8 99 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 SMIM8Q96KF7 97 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 MDFIQ99750 246 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 SLC25A33Q9BSK2 321 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 TMEM126AQ9H061 195 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 FXYD6Q9H0Q3 95 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 CCL28Q9NRJ3 127 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 GAGE2DQ9UEU5 116 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 ERG28Q9UKR5 140 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 TNFSF18Q9UNG2 199 aa6.48□□□□□ -1.37
CHD6-201ENST00000309279 TRAV30A0A087WSZ9 112 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 TMEM218A2RU14 115 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 C1orf196B1AJZ1 125 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 OR7C2O60412 319 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 GCGP01275 180 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 IGKV1-16P04430 117 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 CRYBA1P05813 215 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 BLCAPP62952 87 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 SRSF4Q08170 494 aaKnown RBP6.47□□□□□ -1.37
CHD6-201ENST00000309279 HES1Q14469 280 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 Q5BKY6 102 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 Q8N2B8 174 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.47□□□□□ -1.37
CHD6-201ENST00000309279 NPBQ8NG41 125 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 RITA1Q96K30 269 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 NIPSNAP3BQ9BS92 247 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 NPFFR1Q9GZQ6 430 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 WASHC3Q9Y3C0 194 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 LSM5Q9Y4Y9 91 aaKnown RBP6.47□□□□□ -1.37
CHD6-201ENST00000309279 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 PLXNB1O43157 2135 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 TNCP24821 2201 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 APOA2P02652 100 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 PSG1P11464 419 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 BRWD1-AS2P59051 145 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
CHD6-201ENST00000309279 C1orf194Q5T5A4 169 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 FAAP20Q6NZ36 180 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 Q6ZSV7 163 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 Q8N9W7 124 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 RBMXL1Q96E39 390 aaKnown RBP6.47□□□□□ -1.37
CHD6-201ENST00000309279 HSPB9Q9BQS6 159 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 C20orf85Q9H1P6 137 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 Q9UF83 564 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 MOB4Q9Y3A3 225 aa6.47□□□□□ -1.37
CHD6-201ENST00000309279 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 RBFOX2O43251 390 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD6-201ENST00000309279 PGLYRP1O75594 196 aaPredicted RBP6.46□□□□□ -1.38
CHD6-201ENST00000309279 NDUFA3O95167 84 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 IL7P13232 177 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 FAUP35544 74 aaKnown RBP6.46□□□□□ -1.38
CHD6-201ENST00000309279 OR5I1Q13606 314 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 RTL8BQ17RB0 113 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 COL5A1-AS1Q5SY13 56 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 ZFAND6Q6FIF0 208 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 OR13C8Q8NGS7 320 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 LINC01006Q8NI28 216 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 ASB13Q8WXK3 278 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 RASL10AQ92737 203 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 TAF15Q92804 592 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD6-201ENST00000309279 GPHA2Q96T91 129 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 C19orf24Q9BVV8 132 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 ZNF702PQ9H963 129 aa6.46□□□□□ -1.38
CHD6-201ENST00000309279 NCBP2LA6PVI3 153 aaKnown RBP6.45□□□□□ -1.38
CHD6-201ENST00000309279 TNFSF12O43508 249 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 IGLV2-23P01705 113 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 AMBPP02760 352 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 CNTFRP26992 372 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 TAS2R30P59541 319 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 RND3P61587 244 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 CATR1Q13166 79 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 MMDQ15546 238 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 ZNF57Q68EA5 555 aaPredicted RBP6.45□□□□□ -1.38
CHD6-201ENST00000309279 Q6ZS46 218 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 FAM231DQ6ZW35 169 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 TCTEX1D1Q8N7M0 179 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 OR4F5Q8NH21 305 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 OSR1Q8TAX0 266 aaPredicted RBP6.45□□□□□ -1.38
CHD6-201ENST00000309279 TP53RKQ96S44 253 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 PRSS22Q9GZN4 317 aa6.45□□□□□ -1.38
CHD6-201ENST00000309279 NAP1L6A6NFF2 107 aa6.44□□□□□ -1.38
CHD6-201ENST00000309279 ADARB2-AS1A8MUL3 147 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms