RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 ZNF506Q5JVG8 444 aa6.78□□□□□ -1.32
LCLAT1-201ENST00000309052 ZNF114Q8NC26 417 aa6.78□□□□□ -1.32
LCLAT1-201ENST00000309052 RNASEH2CQ8TDP1 164 aaKnown RBP6.78□□□□□ -1.32
LCLAT1-201ENST00000309052 CACNG8Q8WXS5 425 aa6.78□□□□□ -1.32
LCLAT1-201ENST00000309052 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
LCLAT1-201ENST00000309052 TRAV41A0A0B4J266 112 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 ZNF705DP0CH99 300 aaPredicted RBP6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 ZNF705BP0CI00 300 aaPredicted RBP6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 RNF125Q96EQ8 232 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 PFDN5Q99471 154 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 DNASE2O00115 360 aaPredicted RBP6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 STAG3L2P0CL84 134 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 STAG3L3P0CL85 134 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 HTN1P15515 57 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 S100PP25815 95 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 DEFB1P60022 68 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 MRPL54Q6P161 138 aaKnown RBP6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 OR4F17Q8NGA8 305 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 GLMPQ8WWB7 406 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 C1orf196B1AJZ1 125 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 CTRB1P17538 263 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 CAMPP49913 170 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 CTRB2Q6GPI1 263 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 PATE2Q6UY27 113 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 LY6LH3BQJ8 138 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 NDUFS8O00217 210 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 NDUFA6P56556 154 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 BAGE2Q86Y30 109 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 MBD3L1Q8WWY6 194 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
LCLAT1-201ENST00000309052 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 TRBV12-3P01733 135 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 SELENOTP62341 195 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 ZNF600Q6ZNG1 722 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 PITPNC1Q9UKF7 332 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 MOB4Q9Y3A3 225 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 LSM4Q9Y4Z0 139 aaKnown RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 ODF3BA8MYP8 253 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 K7EIM0 57 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 SLC25A16P16260 332 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 SGMS2Q8NHU3 365 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 GGACTQ9BVM4 153 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 CLN5O75503 358 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 NPPCP23582 126 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 ATP5G2Q06055 141 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 FAM90A2PQ658T7 463 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 OCC1Q8TAD7 63 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 DAZAP1Q96EP5 407 aaKnown RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 CORTO00230 105 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 GGCTO75223 188 aaKnown RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 LY86O95711 162 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 PAX1P15863 534 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 USF2Q15853 346 aaPredicted RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 EIF4E3Q8N5X7 224 aaKnown RBP6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 STXBP6Q8NFX7 210 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 MANBALQ9NQG1 85 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 TMEM167BQ9NRX6 74 aa6.76□□□□□ -1.33
LCLAT1-201ENST00000309052 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 GPX4P36969 197 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PAX8Q06710 450 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 KIAA1644Q3SXP7 199 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 CD33P20138 364 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 GALR1P47211 349 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 FAM71F2Q6NXP2 309 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 TBL2Q9Y4P3 447 aaKnown RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 FAM181BA6NEQ2 426 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 ZNF705FA8MVS1 300 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 GGTLC3B5MD39 225 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 BPIFA4PQ86YQ2 179 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 Q8TAT8 98 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 NAGKQ9UJ70 344 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 NSD1Q96L73 2696 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRSS46E5RG02 174 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 CLDN34H7C241 214 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 SCGB2A1O75556 95 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRR20EP86478 221 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRR20CP86479 221 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRR20DP86480 221 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRR20BP86481 221 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PRR20AP86496 221 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 C1QL4Q86Z23 238 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 PARD6GQ9BYG4 376 aaPredicted RBP6.75□□□□□ -1.33
LCLAT1-201ENST00000309052 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
LCLAT1-201ENST00000309052 TRGC2P03986 189 aa6.74□□□□□ -1.33
LCLAT1-201ENST00000309052 ARL3P36405 182 aa6.74□□□□□ -1.33
LCLAT1-201ENST00000309052 IGKV1D-37A0A075B6S9 117 aa6.74□□□□□ -1.33
LCLAT1-201ENST00000309052 ISLRO14498 428 aa6.74□□□□□ -1.33
LCLAT1-201ENST00000309052 TSPAN9O75954 239 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms