RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 MS4A6AQ9H2W1 248 aa8.35□□□□□ -1.07
APOBEC3F-201ENST00000308521 TET2Q6N021 2002 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 A0A1W2PRE2 83 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 TMEM189A5PLL7 270 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 K7EP34 96 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 MGST3O14880 152 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 CRXO43186 299 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 GNG7O60262 68 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 TNFRSF1AP19438 455 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 SRIP30626 198 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 ATP5IP56385 69 aaPredicted RBP8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 UBE2G1P62253 170 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 S100A7AQ86SG5 101 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 ZNF439Q8NDP4 499 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 LEAP2Q969E1 77 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 ZNF503Q96F45 646 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 FAM208BQ5VWN6 2430 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 TRAV8-6A0A0B4J262 113 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 VSTM5A8MXK1 200 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 APCSP02743 223 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 AZU1P20160 251 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 ZNF134P52741 427 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 TAS2R45P59539 299 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 KIAA1644Q3SXP7 199 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 FAM234AQ9H0X4 552 aa8.34□□□□□ -1.07
APOBEC3F-201ENST00000308521 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 MUC21A0A0G2JKD1 596 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 MUC21A0A140T8X8 626 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 RAB9AP51151 201 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 AP1S3Q96PC3 154 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 H3BRM9 83 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 J3QR89 54 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 ADTRPQ96IZ2 230 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 GAFA1Q96PS6 74 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 RAB9BQ9NP90 201 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 ZNF331Q9NQX6 463 aaPredicted RBP8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 IDI2-AS1Q9NZ38 188 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 MALRD1Q5VYJ5 2156 aa8.33□□□□□ -1.08
APOBEC3F-201ENST00000308521 TMEM8BA6NDV4 472 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 FAM181BA6NEQ2 426 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C19orf84I3L1E1 186 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 SPINK4O60575 86 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 ACTL6BO94805 426 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 CGB3P0DN86 165 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 CGB7P0DN87 165 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 CRYBA4P53673 196 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 CKS1BP61024 79 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 KLF5Q13887 457 aaPredicted RBP8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 FXYD3Q14802 87 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 LYPD2Q6UXB3 125 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 FAM231DQ6ZW35 169 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 ZNF257Q9Y2Q1 563 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 LRRK2Q5S007 2527 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C7orf71A4D174 169 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 USF1P22415 310 aaPredicted RBP8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 COL8A2P25067 703 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C1orf229Q6ZS94 237 aaPredicted RBP8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C1orf122Q6ZSJ8 110 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 SSX8Q7RTT4 187 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 MRPL32Q9BYC8 188 aaKnown RBP8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
APOBEC3F-201ENST00000308521 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 A0A1W2PPR1 153 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 PSMB11A5LHX3 300 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 A6NDN8 102 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 TMEM178BH3BS89 294 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 FCN3O75636 299 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 C8orf88P0DMB2 117 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 TCL1AP56279 114 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 PLP1P60201 277 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 HSD52Q0P140 79 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 CD300EQ496F6 205 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 ITLN2Q8WWU7 325 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 MBD6Q96DN6 1003 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 CHRDL1Q9BU40 450 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 CALYQ9NYX4 217 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 B9A039 149 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 LOXP28300 417 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 C2orf83Q53S99 150 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 ZNF788Q6ZQV5 615 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 BBC3Q96PG8 261 aaPredicted RBP8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 TMEM70Q9BUB7 260 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 DSCAML1Q8TD84 2053 aa8.31□□□□□ -1.08
APOBEC3F-201ENST00000308521 OR11H12B2RN74 326 aa8.3□□□□□ -1.08
APOBEC3F-201ENST00000308521 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms