RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SH2D7A6NKC9 451 aaPredicted RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 AP4M1O00189 453 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 NDUFB8O95169 186 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 BRS3P32247 399 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 RANP62826 216 aaKnown RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 WFDC12Q8WWY7 111 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 C14orf144Q96I85 54 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 SLC25A39Q9BZJ4 359 aaPredicted RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 SRD5A3Q9H8P0 318 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 HIGD1AQ9Y241 93 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 IGHV1-69DA0A0B4J2H0 117 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 H3BTX0 84 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 IGHV1-69P01742 117 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 NBEAP1P0C6P0 100 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 IGHV4-38-2P0DP08 117 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 S100PP25815 95 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 GNG4P50150 75 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 SLC17A3O00476 420 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 PPP1R2P9O14990 202 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 TOMM40O96008 361 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 IGHV3-23P01764 117 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 TRGC1P0CF51 173 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 TAS2R60P59551 318 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 FOXL1Q12952 345 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 CDPF1Q6NVV7 123 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 STXBP6Q8NFX7 210 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 OR10G8Q8NGN5 311 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 SGMS2Q8NHU3 365 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 IMMP2LQ96T52 175 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 C1RLQ9NZP8 487 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 ZANQ9Y493 2812 aa5.13□□□□□ -1.59
USP47-201ENST00000305481 TRAV34A0A0B4J273 112 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 TRAV40A0A0B4J280 105 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 A0A0U1RQK1 487 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 MDFIC2A0A1B0GVS7 189 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 WI2-2373I1.2A0A1W2PRP0 233 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 A1L4Q6 167 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 IFITM10A6NMD0 228 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 TCAPO15273 167 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 ATP6V0E1O15342 81 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 OR2J3O76001 311 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 AMY1AP04745 511 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 TYMSP04818 313 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 GNG5P63218 68 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 TMEM219Q86XT9 240 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 C5orf56Q8N8D9 126 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 ZNF414Q96IQ9 312 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 ZNF48Q96MX3 618 aaPredicted RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 ZNF586Q9NXT0 402 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 V9GYV3 84 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 USP9YO00507 2555 aaPredicted RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 PEX7O00628 323 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 GCGP01275 180 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 PAX1P15863 534 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 S100A7P31151 101 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 MFAP4P55083 255 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 NDUFA6P56556 154 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 NHLRC2Q8NBF2 726 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 RNASE7Q9H1E1 156 aaKnown RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 CDC42EP3Q9UKI2 254 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 PTPN13Q12923 2485 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 PPP5D1E7EU14 171 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 G3V318 75 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 ISLRO14498 428 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 GNG7O60262 68 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 AVPP01185 164 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 MSMBP08118 114 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 HOXA5P20719 270 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 YPEL3P61236 119 aaPredicted RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 USF2Q15853 346 aaPredicted RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 KLK9Q2XQG4 91 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 C21orf62Q9NYP8 219 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 TMEM14CQ9P0S9 112 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 KLK9Q9UKQ9 250 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 EPDR1Q9UM22 224 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 NBPF19A0A087WUL8 3843 aa5.12□□□□□ -1.59
USP47-201ENST00000305481 ANKRD17O75179 2603 aaKnown RBP5.12□□□□□ -1.59
USP47-201ENST00000305481 PGPA6NDG6 321 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 H3BRN7 92 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 TGOLN2O43493 480 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 IL4P05112 153 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 CTSGP08311 255 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 GFI1BQ5VTD9 330 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 KCNIP4Q6PIL6 250 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 UNQ5815/PRO19632Q6UWF5 114 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 FAM110DQ8TAY7 271 aaPredicted RBP5.11□□□□□ -1.59
USP47-201ENST00000305481 C17orf77Q96MU5 243 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 ATG101Q9BSB4 218 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 TMUB1Q9BVT8 246 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 C7orf69Q9H7B7 122 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 FBXL7Q9UJT9 491 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 TRAV30A0A087WSZ9 112 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 A0A096LNT2 108 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 OR2T8A6NH00 312 aa5.11□□□□□ -1.59
USP47-201ENST00000305481 MRPS12O15235 138 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms