RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PSG1P11464 419 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 Q8NFD4 153 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 MRPL32Q9BYC8 188 aaKnown RBP10.82□□□□□ -0.68
CASC4-201ENST00000299957 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 CEACAM3P40198 252 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 CX3CL1P78423 397 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 KLRD1Q13241 179 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
CASC4-201ENST00000299957 GAFA1Q96PS6 74 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 PTPRSQ13332 1948 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 TRBV9A0A0B4J1U6 114 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 TCRBV4S1A1TA0A5B7 111 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 Q8TAT8 98 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 RAB1BQ9H0U4 201 aa10.82□□□□□ -0.68
CASC4-201ENST00000299957 A0A087X0K7 114 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 NPIPB5A8MRT5 1133 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 Q8TCH9 128 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 HIVEP2P31629 2446 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 ZNF883P0CG24 379 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 LGALS7P47929 136 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 C11orf1Q9H5F2 150 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 BOD1L1Q8NFC6 3051 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
CASC4-201ENST00000299957 K7EM74 188 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 PROP1O75360 226 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 IGKV3-20P01619 116 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 MSMPQ1L6U9 139 aa10.81□□□□□ -0.68
CASC4-201ENST00000299957 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
CASC4-201ENST00000299957 KIAA1549Q9HCM3 1950 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 NAV2Q8IVL1 2488 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 TIMM23O14925 209 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 EVI2AP22794 236 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 ZNF788Q6ZQV5 615 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 TEX45Q8NA69 505 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 CACNG8Q8WXS5 425 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 NUP210LQ5VU65 1888 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 GPR183P32249 361 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 C17orf58Q2M2W7 97 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 WT1-ASQ06250 92 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 DAZAP2Q15038 168 aaPredicted RBP10.8□□□□□ -0.68
CASC4-201ENST00000299957 WFDC12Q8WWY7 111 aa10.8□□□□□ -0.68
CASC4-201ENST00000299957 MUC22E2RYF6 1773 aaPredicted RBP10.79□□□□□ -0.68
CASC4-201ENST00000299957 A0A1W2PPI3 338 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 LINC00614P0C842 121 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 RPL15P61313 204 aaKnown RBP10.79□□□□□ -0.68
CASC4-201ENST00000299957 LY6EQ16553 131 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 LDLRAD2Q5SZI1 272 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 C19orf24Q9BVV8 132 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 H0YJW9 148 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 RBPMS2Q6ZRY4 209 aaKnown RBP10.79□□□□□ -0.68
CASC4-201ENST00000299957 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 RABAC1Q9UI14 185 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 V9GYV3 84 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 OR10AG1Q8NH19 301 aa10.79□□□□□ -0.68
CASC4-201ENST00000299957 RNASE6Q93091 150 aaKnown RBP10.79□□□□□ -0.68
CASC4-201ENST00000299957 FNDC4Q9H6D8 234 aaPredicted RBP10.79□□□□□ -0.68
CASC4-201ENST00000299957 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 IGKV2-40A0A087WW87 121 aaPredicted RBP10.78□□□□□ -0.68
CASC4-201ENST00000299957 F2RL2O00254 374 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 IGKV2D-40P01614 121 aaPredicted RBP10.78□□□□□ -0.68
CASC4-201ENST00000299957 TMEM160Q9NX00 188 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 LOXL3P58215 753 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 COTL1Q14019 142 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 Q6ZSR3 168 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 ASCL5Q7RTU5 278 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
CASC4-201ENST00000299957 ZNF502Q8TBZ5 544 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 PRELID3AQ96N28 172 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 TP73-AS1Q9UF72 201 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 CENPEQ02224 2701 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 C18orf32Q8TCD1 76 aa10.78□□□□□ -0.68
CASC4-201ENST00000299957 GLMPQ8WWB7 406 aa10.77□□□□□ -0.68
CASC4-201ENST00000299957 TMEM133Q9H2Q1 129 aa10.77□□□□□ -0.68
CASC4-201ENST00000299957 TMEM14BQ9NUH8 114 aa10.77□□□□□ -0.68
CASC4-201ENST00000299957 ZNF257Q9Y2Q1 563 aa10.77□□□□□ -0.68
CASC4-201ENST00000299957 LIPFP07098 398 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 RPL7P18124 248 aaKnown RBP10.77□□□□□ -0.69
CASC4-201ENST00000299957 CACNG7P62955 275 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 ADIPOQQ15848 244 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 STPG4Q8N801 248 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 LOXL4Q96JB6 756 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 IGKV1OR2-108A0A075B7D4 117 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 C9JCJ5 164 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 TM4SF5O14894 197 aa10.77□□□□□ -0.69
CASC4-201ENST00000299957 ALKBH7Q9BT30 221 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms