RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 PMS2CLQ68D20 193 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 SRSF12Q8WXF0 261 aaKnown RBP10.46□□□□□ -0.73
TVP23A-201ENST00000299866 LTAP01374 205 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 NMUP48645 174 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 ATP5IP56385 69 aaPredicted RBP10.46□□□□□ -0.73
TVP23A-201ENST00000299866 CT83Q5H943 113 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 Q6ZT83 130 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 CCL13Q99616 98 aa10.46□□□□□ -0.73
TVP23A-201ENST00000299866 SERTM2A0A1B0GWG4 89 aa10.46□□□□□ -0.74
TVP23A-201ENST00000299866 IFI27P40305 119 aaPredicted RBP10.46□□□□□ -0.74
TVP23A-201ENST00000299866 RBPJQ06330 500 aa10.46□□□□□ -0.74
TVP23A-201ENST00000299866 HCP5Q6MZN7 132 aa10.46□□□□□ -0.74
TVP23A-201ENST00000299866 DSCAMO60469 2012 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 LGALS7P47929 136 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 CACNG7P62955 275 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 MZT1Q08AG7 82 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 GOLT1AQ6ZVE7 132 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 NEGR1Q7Z3B1 354 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 NPFFR1Q9GZQ6 430 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 TANC2Q9HCD6 1990 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 HAX1O00165 279 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 GUCD1Q96NT3 240 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 SIT1Q9Y3P8 196 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 CFHR2P36980 270 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 WFDC3Q8IUB2 231 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 RAB9BQ9NP90 201 aa10.45□□□□□ -0.74
TVP23A-201ENST00000299866 A0A1W2PPM0 123 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 HSD52Q0P140 79 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 EXOC3-AS1Q8N2X6 119 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 STXBP6Q8NFX7 210 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 IGHV1-18A0A0C4DH31 117 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 C22orf46C9J442 243 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
TVP23A-201ENST00000299866 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 OR5AN1Q8NGI8 311 aa10.44□□□□□ -0.74
TVP23A-201ENST00000299866 ATP1A1-AS1Q5TC04 95 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 C9orf172C9J069 976 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 SUB1P53999 127 aaKnown RBP eCLIP10.43□□□□□ -0.74
TVP23A-201ENST00000299866 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 Q86TA4 180 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 BOD1L2Q8IYS8 172 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 ZADH2Q8N4Q0 377 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 INTS1Q8N201 2190 aaKnown RBP10.43□□□□□ -0.74
TVP23A-201ENST00000299866 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 CGB1A6NKQ9 187 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 ZNF207O43670 478 aaKnown RBP10.43□□□□□ -0.74
TVP23A-201ENST00000299866 FABP2P12104 132 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 RIGQ13278 110 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 LPAL2Q16609 132 aa10.43□□□□□ -0.74
TVP23A-201ENST00000299866 MBNL2Q5VZF2 373 aaKnown RBP10.43□□□□□ -0.74
TVP23A-201ENST00000299866 SLC25A48Q6ZT89 311 aaKnown RBP10.43□□□□□ -0.74
TVP23A-201ENST00000299866 MDS2Q8NDY4 140 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 PPIAL4CA0A0B4J2A2 164 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 PPIAL4GP0DN37 164 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 RPUSD1Q9UJJ7 312 aaKnown RBP10.42□□□□□ -0.74
TVP23A-201ENST00000299866 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 AZU1P20160 251 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 GCSHP23434 173 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 DIAPH2-AS1Q14236 149 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 THAP8Q8NA92 274 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 OR5A1Q8NGJ0 315 aa10.42□□□□□ -0.74
TVP23A-201ENST00000299866 OSR1Q8TAX0 266 aaPredicted RBP10.42□□□□□ -0.74
TVP23A-201ENST00000299866 A0A096LNJ9 63 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 Q5PR19 223 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 D6R8Y8 96 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 GP9P14770 177 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 KIR2DL2P43627 348 aaPredicted RBP10.41□□□□□ -0.74
TVP23A-201ENST00000299866 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 ZCCHC24Q8N2G6 241 aaKnown RBP10.41□□□□□ -0.74
TVP23A-201ENST00000299866 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
TVP23A-201ENST00000299866 NPIPB6E9PJ23 425 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 SLC25A17O43808 307 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 LYZP61626 148 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 RPRMLQ8N4K4 120 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 C9orf106Q8NAJ2 232 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 OR9G4Q8NGQ1 327 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
TVP23A-201ENST00000299866 K7ERJ3 54 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 CCL3L1P16619 93 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 TIMM23BQ5SRD1 257 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 ABHD17AQ96GS6 310 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 ZNF414Q96IQ9 312 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 GAFA1Q96PS6 74 aa10.4□□□□□ -0.75
TVP23A-201ENST00000299866 ROS1P08922 2347 aa10.39□□□□□ -0.75
TVP23A-201ENST00000299866 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
TVP23A-201ENST00000299866 M0R1B8 84 aa10.39□□□□□ -0.75
TVP23A-201ENST00000299866 LHBP01229 141 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms