RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 C9JCJ5 164 aa8.18□□□□□ -1.1
GABRB3-201ENST00000299267 SNRPD3P62318 126 aaKnown RBP8.18□□□□□ -1.1
GABRB3-201ENST00000299267 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
GABRB3-201ENST00000299267 RNASE7Q9H1E1 156 aaKnown RBP8.18□□□□□ -1.1
GABRB3-201ENST00000299267 NDUFB8O95169 186 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 PPIFP30405 207 aaKnown RBP8.17□□□□□ -1.1
GABRB3-201ENST00000299267 RIGQ13278 110 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 DDB2Q92466 427 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TMEM250H0YL14 139 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TCTAP57738 103 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 CRIP3Q6Q6R5 217 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 ZNF843Q8N446 348 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 PIP4P2Q8N4L2 257 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 AP1S3Q96PC3 154 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 PSG9Q00887 426 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 MST1LQ2TV78 715 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TMEM95Q3KNT9 176 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TMEM14BQ9NUH8 114 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 M0R3E3 92 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 CA1P00915 261 aaPredicted RBP8.17□□□□□ -1.1
GABRB3-201ENST00000299267 GCGP01275 180 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TXN2Q99757 166 aa8.17□□□□□ -1.1
GABRB3-201ENST00000299267 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 OVOL3O00110 214 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 ITGB1BP1O14713 200 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 TGOLN2O43493 480 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 FCER1GP30273 86 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
GABRB3-201ENST00000299267 SFRP2Q96HF1 295 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 FREM2Q5SZK8 3169 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 Q6ZPA2 131 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 C1orf122Q6ZSJ8 110 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 RNF5Q99942 180 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 M0R381 172 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 EMP1P54849 157 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 DEFB112Q30KQ8 113 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 NDUFA4L2Q9NRX3 87 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 NCKAP5O14513 1909 aa8.16□□□□□ -1.1
GABRB3-201ENST00000299267 APCSP02743 223 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 ZNF688P0C7X2 276 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 CBLN1P23435 193 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 RAB9AP51151 201 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 DEFB113Q30KQ7 82 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 WDR73Q6P4I2 378 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 TOMM20LQ6UXN7 152 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 A8MXK9 166 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 FGF16O43320 207 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 SMUG1Q53HV7 270 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 PVRIGQ6DKI7 326 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 KLHL30-AS1Q8NEE0 82 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 SLC25A39Q9BZJ4 359 aaPredicted RBP8.15□□□□□ -1.1
GABRB3-201ENST00000299267 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 SYNJ2BPP57105 145 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 BLCAPP62952 87 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 C12orf57Q99622 126 aa8.15□□□□□ -1.1
GABRB3-201ENST00000299267 TMEM249Q2WGJ8 235 aa8.15□□□□□ -1.11
GABRB3-201ENST00000299267 JKAMPQ9P055 326 aa8.15□□□□□ -1.11
GABRB3-201ENST00000299267 SEC14L6B5MCN3 397 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 HOXA3O43365 443 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-201ENST00000299267 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 OCC1Q8TAD7 63 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 HIST1H2BAQ96A08 127 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 IMMP2LQ96T52 175 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 ELOVL1Q9BW60 279 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 IGKV2-40A0A087WW87 121 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-201ENST00000299267 ISLRO14498 428 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 IGKV2D-40P01614 121 aaPredicted RBP8.14□□□□□ -1.11
GABRB3-201ENST00000299267 PRSS1P07477 247 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 OR5AL1P0C617 328 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 TEX38Q6PEX7 206 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 HAPLN4Q86UW8 402 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 NCOR1P1Q9H4R4 102 aa8.14□□□□□ -1.11
GABRB3-201ENST00000299267 HOXB4P17483 251 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-201ENST00000299267 RNASE4P34096 147 aaKnown RBP8.13□□□□□ -1.11
GABRB3-201ENST00000299267 DGAT2L7PQ6IED9 249 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 LINC00311Q8N616 119 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 Q8TAT8 98 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 EPDR1Q9UM22 224 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 CENPVL3A0A0U1RRI6 287 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 M0R2Z0 102 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 RPL23P62829 140 aaKnown RBP8.13□□□□□ -1.11
GABRB3-201ENST00000299267 DAZAP2Q15038 168 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-201ENST00000299267 PSMG4Q5JS54 123 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 LDLRAD2Q5SZI1 272 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 DTX2Q86UW9 622 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 TCF24Q7RTU0 167 aa8.13□□□□□ -1.11
GABRB3-201ENST00000299267 C5orf30Q96GV9 206 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms