RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 KIF26BQ2KJY2 2108 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 C11orf52Q96A22 123 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 A0A096LPE4 126 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 A0A1W2PPZ6 126 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 HRKO00198 91 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 SPATA46Q5T0L3 261 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 LTN1O94822 1766 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 FAM236DA0A1B0GTK5 79 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 FAM236CP0DP71 79 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 DDB2Q92466 427 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 LINC00312Q9Y6C7 94 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 RNF144BQ7Z419 303 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 NDUFS7O75251 213 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 CSRP1P21291 193 aaKnown RBP9.59□□□□□ -0.87
SNIP1-201ENST00000296215 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 SCNM1Q9BWG6 230 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 MBD3L4A6NDZ8 208 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-201ENST00000296215 MBD3L3A6NE82 208 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-201ENST00000296215 MBD3L5A6NJ08 208 aaPredicted RBP9.59□□□□□ -0.87
SNIP1-201ENST00000296215 MYOD1P15172 320 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 CT83Q5H943 113 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 Q8N1Y9 231 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 DDX60Q8IY21 1712 aaKnown RBP9.59□□□□□ -0.87
SNIP1-201ENST00000296215 C17orf98A8MV24 154 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
SNIP1-201ENST00000296215 LAGE3Q14657 143 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 OTORQ9NRC9 128 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 FOXA2Q9Y261 457 aaPredicted RBP9.58□□□□□ -0.88
SNIP1-201ENST00000296215 RNASE2P10153 161 aaKnown RBP9.58□□□□□ -0.88
SNIP1-201ENST00000296215 SLC25A16P16260 332 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 MALP21145 153 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 ZNF714Q96N38 554 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 GFRA4Q9GZZ7 299 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 DLL3Q9NYJ7 618 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
SNIP1-201ENST00000296215 LINC00310P59036 64 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 FAM168AQ92567 244 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 PRDM14Q9GZV8 571 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 JPT2Q9H910 190 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 UNC13CQ8NB66 2214 aa9.58□□□□□ -0.88
SNIP1-201ENST00000296215 SCN3AQ9NY46 2000 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 TM4SF19Q96DZ7 209 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 SPRY4Q9C004 299 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 SLC25A15Q9Y619 301 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 MAP1BP46821 2468 aaKnown RBP9.57□□□□□ -0.88
SNIP1-201ENST00000296215 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 RTTNQ86VV8 2226 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 RBAKDNA6NC62 111 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 Q9H3A6 140 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 TRIP12Q14669 1992 aaPredicted RBP9.57□□□□□ -0.88
SNIP1-201ENST00000296215 A0A087WX48 190 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 ARMS2P0C7Q2 107 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 A0A1W2PR77 199 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 CTGFP29279 349 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 CR1LQ2VPA4 569 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 IFI27L2Q9H2X8 130 aa9.57□□□□□ -0.88
SNIP1-201ENST00000296215 SMKR1H3BMG3 65 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 CFC1BP0CG36 223 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 CFC1P0CG37 223 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 FOXG1P55316 489 aaPredicted RBP9.56□□□□□ -0.88
SNIP1-201ENST00000296215 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 KLK10O43240 276 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 SRD5A1P18405 259 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 C1orf210Q8IVY1 113 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 BRWD3Q6RI45 1802 aa9.56□□□□□ -0.88
SNIP1-201ENST00000296215 DDX60LQ5H9U9 1706 aaKnown RBP9.55□□□□□ -0.88
SNIP1-201ENST00000296215 J3QT63 122 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 IGHMP01871 453 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 C10orf128Q5T292 105 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 ASPHD1Q5U4P2 390 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 CXorf67Q86X51 503 aaPredicted RBP9.55□□□□□ -0.88
SNIP1-201ENST00000296215 WDR31Q8NA23 367 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 DSCR8Q96T75 97 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 CDIP1Q9H305 208 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 DOCK6Q96HP0 2047 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 COL18A1P39060 1754 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 IGHV3-20A0A0C4DH32 117 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 COX7CP15954 63 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 TRPT1Q86TN4 253 aaKnown RBP9.55□□□□□ -0.88
SNIP1-201ENST00000296215 IGHV3-21A0A0B4J1V1 117 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 NPIPB13A6NJU9 1138 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 NPIPB4C9JG80 1138 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 LINC00643Q86TS7 51 aa9.55□□□□□ -0.88
SNIP1-201ENST00000296215 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
SNIP1-201ENST00000296215 MS4A18H0YCH9 400 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 MS4A18Q3C1V0 323 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 SLC25A53Q5H9E4 307 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 FSCN3Q9NQT6 498 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
SNIP1-201ENST00000296215 DLEC1Q9Y238 1755 aa9.54□□□□□ -0.88
SNIP1-201ENST00000296215 IGKV1D-43A0A0B4J1Z2 117 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms