RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 LY6G6EA0A0G2JKS1 128 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 MBD3L4A6NDZ8 208 aaPredicted RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 MBD3L3A6NE82 208 aaPredicted RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 MBD3L5A6NJ08 208 aaPredicted RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 MBD3L2Q8NHZ7 208 aaPredicted RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 U3KQA8 63 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 TRAV8-6A0A0B4J262 113 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 EMP1P54849 157 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 FXYD7P58549 80 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 SNRPD3P62318 126 aaKnown RBP11.04□□□□□ -0.64
HPS3-201ENST00000296051 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
HPS3-201ENST00000296051 DEFB121Q5J5C9 76 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 DTX1Q86Y01 620 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 OR52E5Q8NH55 327 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 MEGF9Q9H1U4 602 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 F2Z2F3 143 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
HPS3-201ENST00000296051 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 ASCL4Q6XD76 172 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
HPS3-201ENST00000296051 VDAC2P45880 294 aaPredicted RBP11.03□□□□□ -0.64
HPS3-201ENST00000296051 DNLZQ5SXM8 178 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 SRD5A1P18405 259 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 Q5PR19 223 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 SFTA2Q6UW10 78 aa11.03□□□□□ -0.64
HPS3-201ENST00000296051 NUPR1O60356 82 aa11.02□□□□□ -0.64
HPS3-201ENST00000296051 HIST1H1AQ02539 215 aaPredicted RBP11.02□□□□□ -0.64
HPS3-201ENST00000296051 RNASEH2CQ8TDP1 164 aaKnown RBP11.02□□□□□ -0.64
HPS3-201ENST00000296051 TMEM133Q9H2Q1 129 aa11.02□□□□□ -0.64
HPS3-201ENST00000296051 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 Q6P435 159 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 OSR1Q8TAX0 266 aaPredicted RBP11.02□□□□□ -0.65
HPS3-201ENST00000296051 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 ASCL2Q99929 193 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 PCDH15Q96QU1 1955 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.65
HPS3-201ENST00000296051 A0A087X0K7 114 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 IGHG3P01860 377 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 MYOZ3Q8TDC0 251 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 GPR82Q96P67 336 aa11.02□□□□□ -0.65
HPS3-201ENST00000296051 MRPL32Q9BYC8 188 aaKnown RBP11.01□□□□□ -0.65
HPS3-201ENST00000296051 RPP21Q9H633 154 aaKnown RBP11.01□□□□□ -0.65
HPS3-201ENST00000296051 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
HPS3-201ENST00000296051 H7C2G1 150 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 COQ2Q96H96 371 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 TSPOP30536 169 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 PSMB2P49721 201 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
HPS3-201ENST00000296051 DYSFO75923 2080 aa11□□□□□ -0.65
HPS3-201ENST00000296051 TIMM23O14925 209 aa11□□□□□ -0.65
HPS3-201ENST00000296051 LINC00614P0C842 121 aa11□□□□□ -0.65
HPS3-201ENST00000296051 ZNF414Q96IQ9 312 aa11□□□□□ -0.65
HPS3-201ENST00000296051 A0A1W2PRE2 83 aa11□□□□□ -0.65
HPS3-201ENST00000296051 TMEM160Q9NX00 188 aa11□□□□□ -0.65
HPS3-201ENST00000296051 TRAV8-1A0A0A6YYK1 113 aa11□□□□□ -0.65
HPS3-201ENST00000296051 H3BUX3 64 aa11□□□□□ -0.65
HPS3-201ENST00000296051 SNCGO76070 127 aa11□□□□□ -0.65
HPS3-201ENST00000296051 HIST1H4GQ99525 98 aa11□□□□□ -0.65
HPS3-201ENST00000296051 ZNRD1Q9P1U0 126 aa11□□□□□ -0.65
HPS3-201ENST00000296051 TICRRQ7Z2Z1 1910 aa11□□□□□ -0.65
HPS3-201ENST00000296051 ZNF503-AS2A6NEH8 195 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 B3GALT5-AS1P59052 145 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
HPS3-201ENST00000296051 KLRD1Q13241 179 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 NBR2O15453 112 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 TSKUQ8WUA8 353 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 Q9H3A6 140 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 CX3CL1P78423 397 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 OR10J3Q5JRS4 329 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 PRELID3AQ96N28 172 aa10.99□□□□□ -0.65
HPS3-201ENST00000296051 UPK2O00526 184 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 PSG1P11464 419 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 CD69Q07108 199 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 FAM74A4Q5TZK3 123 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 STPG4Q8N801 248 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 IGKV3OR2-268A0A0C4DH90 116 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 COL8A2P25067 703 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 SAPCD1Q5SSQ6 148 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 EPDR1Q9UM22 224 aa10.98□□□□□ -0.65
HPS3-201ENST00000296051 YPEL1O60688 119 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms