RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 BLNKQ8WV28 456 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 ASH1LQ9NR48 2969 aaKnown RBP7.19□□□□□ -1.26
PDPN-201ENST00000294489 CRYBG3Q68DQ2 2970 aa7.19□□□□□ -1.26
PDPN-201ENST00000294489 K7EN84 100 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 CRIP2P52943 208 aaPredicted RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 ERVFC1-1P60608 527 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 Q56UQ5 140 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 TMUB1Q9BVT8 246 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIF1ANQ9NWT6 349 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 PEX7O00628 323 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BKO60814 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 AVPP01185 164 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 S100A9P06702 114 aaKnown RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BJP06899 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 IGHV4-38-2P0DP08 117 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 GP9P14770 177 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H1BP16401 226 aaKnown RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BOP23527 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BBP33778 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BDP58876 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BCP62807 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST2H2BEQ16778 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BHQ93079 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BNQ99877 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H2BMQ99879 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 C7orf69Q9H7B7 122 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 TRAV40A0A0B4J280 105 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 PGPA6NDG6 321 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 SLC25A5P05141 298 aaKnown RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 SNRPCP09234 159 aaKnown RBP7.18□□□□□ -1.26
PDPN-201ENST00000294489 NDUFA6P56556 154 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 LEMD1Q68G75 181 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 C5orf56Q8N8D9 126 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 RNF125Q96EQ8 232 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 TMEM68Q96MH6 324 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 RNF24Q9Y225 148 aa7.18□□□□□ -1.26
PDPN-201ENST00000294489 IGHV3OR16-10A0A075B7F0 116 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 A0A0U1RQK1 487 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 OR2J3O76001 311 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 TYMSP04818 313 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 IL4P05112 153 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 TRGC1P0CF51 173 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 IGHV4-31P0DP07 118 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 UNQ5815/PRO19632Q6UWF5 114 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 FRZBQ92765 325 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 HSPB9Q9BQS6 159 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 EPDR1Q9UM22 224 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 S4R3C0 116 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 ZNF320A2RRD8 509 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 S100A8P05109 93 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 HIST1H1EP10412 219 aaKnown RBP7.17□□□□□ -1.26
PDPN-201ENST00000294489 MGST1P10620 155 aaKnown RBP7.17□□□□□ -1.26
PDPN-201ENST00000294489 MYCNOSP40205 109 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 BPIFA4PQ86YQ2 179 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 LINC00518Q8N0U6 118 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 ZNF491Q8N8L2 437 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 FAM110DQ8TAY7 271 aaPredicted RBP7.17□□□□□ -1.26
PDPN-201ENST00000294489 SHANK2-AS3Q9BTD1 123 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 IL36BQ9NZH7 164 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 FBXL7Q9UJT9 491 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 CELSR2Q9HCU4 2923 aa7.17□□□□□ -1.26
PDPN-201ENST00000294489 NDUFB8O95169 186 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 GCGP01275 180 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 UBE2G1P62253 170 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 OR5I1Q13606 314 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 ECSCRQ19T08 205 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 C5orf17Q8NAS9 161 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 IGF2BP2-AS1Q96M15 143 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 TXN2Q99757 166 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 TRAV9-1A0A075B6T8 112 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 A6NDX4 124 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 AMY1AP04745 511 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 FCGR2BP31994 310 aaPredicted RBP7.16□□□□□ -1.26
PDPN-201ENST00000294489 Q5PR19 223 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 BRD3OSQ6XYD6 125 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 OR4F17Q8NGA8 305 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 OSTCQ9NRP0 149 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 MOB4Q9Y3A3 225 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 PRRC2AP48634 2157 aaKnown RBP7.16□□□□□ -1.26
PDPN-201ENST00000294489 ABCA1O95477 2261 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 CHD6Q8TD26 2715 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 WI2-2373I1.2A0A1W2PRP0 233 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 H3BRN7 92 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 SLC17A3O00476 420 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 ISLRO14498 428 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 HOXA5P20719 270 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 S100A12P80511 92 aa7.16□□□□□ -1.26
PDPN-201ENST00000294489 RPL19P84098 196 aaKnown RBP7.16□□□□□ -1.26
PDPN-201ENST00000294489 RPEL1Q2QD12 228 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms