RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RPRMLQ8N4K4 120 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZNF319Q9P2F9 582 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 FBXL7Q9UJT9 491 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 DOPEY2Q9Y3R5 2298 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 WDFY4Q6ZS81 3184 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 MYO7BQ6PIF6 2116 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 EFNA2O43921 213 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 NDUFS6O75380 124 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 FOXF2Q12947 444 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 GAGE13Q4V321 117 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 RPP25LQ8N5L8 163 aaKnown RBP9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 FAM216BQ8N7L0 139 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 GZMBP10144 247 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 GNG5P63218 68 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 SRSF1Q07955 248 aaKnown RBP eCLIP9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 RTN4RL2Q86UN3 420 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 CPAMD8Q8IZJ3 1885 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZFYVE26Q68DK2 2539 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 NMSQ5H8A3 153 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 SLC50A1Q9BRV3 221 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 PSG8Q9UQ74 426 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 PAX1P15863 534 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 SLC25A48Q6ZT89 311 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 PCSK5Q92824 1860 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 LYL1P12980 280 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 DUTP33316 252 aaKnown RBP9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 POLEQ07864 2286 aa9.76□□□□□ -0.85
SYNGAP1-201ENST00000293748 DIDO1Q9BTC0 2240 aaKnown RBP9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 PSMB11A5LHX3 300 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 RAMP3O60896 148 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKCP01834 107 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 FAM27E3Q08E93 113 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 MORN2Q502X0 79 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 TMEM256Q8N2U0 113 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 SAA2-SAA4A0A096LPE2 208 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 SAA2P0DJI9 122 aaPredicted RBP9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 PYYP10082 97 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZNF664Q8N3J9 261 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZNF407Q9C0G0 2248 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 FREM3P0C091 2139 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 FBXL19-AS1Q494R0 122 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 TMEM14EPQ6UXP3 125 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 TMEM101Q96IK0 257 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 MRPL27Q9P0M9 148 aaKnown RBP9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 PIEZO2Q9H5I5 2752 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGHV2OR16-5A0A0B4J2B6 119 aa9.75□□□□□ -0.85
SYNGAP1-201ENST00000293748 TGFAP01135 160 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 TRGV3P03979 118 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 ADCYAP1P18509 176 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 A0A0G2JLM5 398 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 PLNP26678 52 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 TMEM95Q3KNT9 176 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 NUDT10Q8NFP7 164 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 F2Z2F3 143 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 WISP2O76076 250 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 C3orf79P0CE67 100 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 CRYGSP22914 178 aa9.74□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV1-12A0A0C4DH73 117 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 FOXH1O75593 365 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV1D-12P01611 117 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 DMRTC2Q8IXT2 367 aaPredicted RBP9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 DUX5Q96PT3 197 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 APOBEC3AP31941 199 aaPredicted RBP9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 NUP37Q8NFH4 326 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 CNTFRP26992 372 aa9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 IFI27P40305 119 aaPredicted RBP9.73□□□□□ -0.85
SYNGAP1-201ENST00000293748 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 GHRHP01286 108 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 PPP1R27Q86WC6 154 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 KLHDC3Q9BQ90 382 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 FAM201AQ5SY85 155 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 A8MWP6 167 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV1D-33P01593 117 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 IGKV1-33P01594 117 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 GTF3C1Q12789 2109 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 PAX2Q02962 417 aa9.72□□□□□ -0.85
SYNGAP1-201ENST00000293748 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms