RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
HIF3A-203ENST00000291300 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 NBEAP1P0C6P0 100 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 BLCAPP62952 87 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 OR5I1Q13606 314 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 CENPWQ5EE01 88 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 TRBV9A0A0B4J1U6 114 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 HELTA6NFD8 242 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 H7BYZ3 331 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 IGHV4-31P0DP07 118 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 RPS10P46783 165 aaKnown RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 LOXL1Q08397 574 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 C19orf54Q5BKX5 351 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF48Q96MX3 618 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 BEX4Q9NWD9 120 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-203ENST00000291300 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
HIF3A-203ENST00000291300 TRAV34A0A0B4J273 112 aa13.02□□□□□ -0.33
HIF3A-203ENST00000291300 YPEL3P61236 119 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-203ENST00000291300 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
HIF3A-203ENST00000291300 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.33
HIF3A-203ENST00000291300 THYN1Q9P016 225 aa13.02□□□□□ -0.33
HIF3A-203ENST00000291300 H3BRN7 92 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 FCGR2BP31994 310 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-203ENST00000291300 DEFB112Q30KQ8 113 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 NHLRC2Q8NBF2 726 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 SGK494Q96LW2 274 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 Q96MF0 132 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 NOL4LQ96MY1 436 aaPredicted RBP13.01□□□□□ -0.33
HIF3A-203ENST00000291300 IGLV2-8P01709 118 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 GATA3P23771 443 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 GPR183P32249 361 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 GALR1P47211 349 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 SFRP2Q96HF1 295 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
HIF3A-203ENST00000291300 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 TRAV41A0A0B4J266 112 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 PGPA6NDG6 321 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 C9JCJ5 164 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 TSPAN9O75954 239 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 TEX38Q6PEX7 206 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 FAM210BQ96KR6 192 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 J3QKU1 62 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 IGHV4-59P01825 116 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 FAM3BP58499 235 aaPredicted RBP13□□□□□ -0.33
HIF3A-203ENST00000291300 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 PSMG3-AS1Q96PY0 264 aa13□□□□□ -0.33
HIF3A-203ENST00000291300 SLC17A3O00476 420 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 PEX7O00628 323 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
HIF3A-203ENST00000291300 CLEC3BP05452 202 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 GNG4P50150 75 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 VN1R17PQ8TDU5 208 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-203ENST00000291300 RPH3ALQ9UNE2 315 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
HIF3A-203ENST00000291300 ZNF98A6NK75 572 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 ISLRO14498 428 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 FABP1P07148 127 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
HIF3A-203ENST00000291300 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 LRRC75A-AS1Q8N1F1 130 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 Q9H3A6 140 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 ITPR3Q14573 2671 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 TRBV24-1A0A075B6N3 115 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 TRGC2P03986 189 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
HIF3A-203ENST00000291300 RAB5BP61020 215 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-203ENST00000291300 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
HIF3A-203ENST00000291300 A0A1W2PPQ1 181 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 CIARTQ8N365 385 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-203ENST00000291300 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 RNASE7Q9H1E1 156 aaKnown RBP12.97□□□□□ -0.33
HIF3A-203ENST00000291300 EPDR1Q9UM22 224 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 PRELID1Q9Y255 219 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 PDZD2O15018 2839 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 IGHG2P01859 326 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 IGLC2P0DOY2 106 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 HIST1H1EP10412 219 aaKnown RBP12.97□□□□□ -0.33
HIF3A-203ENST00000291300 CRIP2P52943 208 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-203ENST00000291300 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 LCNL1Q6ZST4 164 aa12.97□□□□□ -0.33
HIF3A-203ENST00000291300 CCDC168Q8NDH2 2452 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 CD99P14209 185 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 RPL15P61313 204 aaKnown RBP12.96□□□□□ -0.33
HIF3A-203ENST00000291300 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
HIF3A-203ENST00000291300 TMEM68Q96MH6 324 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms