RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 UPK2O00526 184 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 FCN1O00602 326 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 NBR2O15453 112 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 IGKV1-16P04430 117 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 HSPE1P61604 102 aaKnown RBP6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 C2orf83Q53S99 150 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 ARPC1AQ92747 370 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 GPR146Q96CH1 333 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 UBE2E2Q96LR5 201 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 NPVFQ9HCQ7 196 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF580Q9UK33 172 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 SAA1P0DJI8 122 aaPredicted RBP6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 SULT1A2P50226 295 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 H2BFSP57053 126 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 RHOGP84095 191 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 TMEM14BQ9NUH8 114 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 A6NDX4 124 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 C11orf94C9JXX5 98 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 RRHO14718 337 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 MPC2O95563 127 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 RELQ04864 619 aaPredicted RBP6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 PMS2P11Q13670 270 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 MOB4Q9Y3A3 225 aa6.72□□□□□ -1.33
PTPDC1-201ENST00000288976 CBY3A6NI87 242 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 PSCAO43653 123 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 TSPOP30536 169 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 C2orf68Q2NKX9 166 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 Q6ZN92 141 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 ST6GAL2Q96JF0 529 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 HSPB7Q9UBY9 170 aa6.71□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 CX3CL1P78423 397 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 C11orf87Q6NUJ2 197 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 TRAV34A0A0B4J273 112 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 CLDN34H7C241 214 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 LY6G6DO95868 133 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 HLA-DRB1P01911 266 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 CXCL3P19876 107 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 BTF3P20290 206 aaKnown RBP6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 IER3P46695 156 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 ATP5IP56385 69 aaPredicted RBP6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 OR10C1Q96KK4 312 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 HELTA6NFD8 242 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 LINC00205P59089 165 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 PIFOQ8TCI5 191 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 DEFB104AQ8WTQ1 72 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 PXMP4Q9Y6I8 212 aa6.71□□□□□ -1.34
PTPDC1-201ENST00000288976 CORTO00230 105 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 OR9G9P0C7N8 305 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 GATA2P23769 480 aaPredicted RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 ID3Q02535 119 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 TWIST1Q15672 202 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 C10orf55Q5SWW7 151 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 GOLT1AQ6ZVE7 132 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 PEMTQ9UBM1 199 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 SIGLEC9Q9Y336 463 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 A0A0G2JRQ6 117 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 SRRM4A7MD48 611 aaKnown RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 M0R3E3 92 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 MBPP02686 304 aaPredicted RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 SUMO2P61956 95 aaKnown RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 ICAM4Q14773 271 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 PRSS8Q16651 343 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 GUK1Q16774 197 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 C5orf64Q2M2E5 130 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 DEFB112Q30KQ8 113 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 OR1L6Q8NGR2 347 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 C11orf1Q9H5F2 150 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 CRYBG3Q68DQ2 2970 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 CRIP2P52943 208 aaPredicted RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 MRGPRG-AS1Q2M3A8 158 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 WNT10AQ9GZT5 417 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF430Q9H8G1 570 aaPredicted RBP6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 U3KQ87 197 aa6.7□□□□□ -1.34
PTPDC1-201ENST00000288976 IGKV3D-20A0A0C4DH25 116 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 DEDDO75618 318 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 IGHV3-53P01767 116 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 C1QBP02746 253 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 SGMS2Q8NHU3 365 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 SRSF12Q8WXF0 261 aaKnown RBP6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 IGSF23A1L1A6 192 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 COMPP49747 757 aaPredicted RBP6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 SELENOTP62341 195 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 PRCDQ00LT1 54 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 TNFRSF9Q07011 255 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 LURAP1LQ8IV03 231 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 ZNF114Q8NC26 417 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 VPREB3Q9UKI3 123 aa6.69□□□□□ -1.34
PTPDC1-201ENST00000288976 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms