RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 A0A1W2PS18 150 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 SOCS3O14543 225 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 SSSCA1O60232 199 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 DEDDO75618 318 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 IL4P05112 153 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 GIG44P09565 113 aaPredicted RBP6.75□□□□□ -1.33
HMGN1-201ENST00000288344 P2RY1P47900 373 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 H2BFSP57053 126 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
HMGN1-201ENST00000288344 DLK1P80370 383 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 VWC2Q2TAL6 325 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 OR8G2PQ6IF36 304 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 ACOT7LQ6ZUV0 252 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 RNF125Q96EQ8 232 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 RCHY1Q96PM5 261 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 METTL26Q96S19 204 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 RNF126Q9BV68 326 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 MAP6D1Q9H9H5 199 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 SEPSECSQ9HD40 501 aaKnown RBP6.75□□□□□ -1.33
HMGN1-201ENST00000288344 GSKIPQ9P0R6 139 aa6.75□□□□□ -1.33
HMGN1-201ENST00000288344 RYR2Q92736 4967 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 OR4C46A6NHA9 309 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 PRAF2O60831 178 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 HNRNPCP07910 306 aaKnown RBP eCLIP6.74□□□□□ -1.335e-6■■■□□ 18.1
HMGN1-201ENST00000288344 METTL15P1P0C7V9 234 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 LINC00869P0C866 280 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
HMGN1-201ENST00000288344 RAB32Q13637 225 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 PATE2Q6UY27 113 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 APRG1Q8IVJ8 170 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 OVOL2Q9BRP0 275 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 GGACTQ9BVM4 153 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 SLC45A2Q9UMX9 530 aa6.74□□□□□ -1.33
HMGN1-201ENST00000288344 HYDINQ4G0P3 5121 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 KIR2DL5BA0A0G2JN68 375 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 KIR2DL5BA0A0G2JPC4 375 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 FAM24AA6NFZ4 105 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 ZFP92A6NM28 416 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 MRPS12O15235 138 aaKnown RBP6.73□□□□□ -1.33
HMGN1-201ENST00000288344 SIX6O95475 246 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 EIF2B2P49770 351 aaKnown RBP6.73□□□□□ -1.33
HMGN1-201ENST00000288344 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
HMGN1-201ENST00000288344 C1orf194Q5T5A4 169 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 KIR2DL5AQ8N109 375 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 TMEM252Q8N6L7 170 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 ENKURQ8TC29 256 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 SLC35E1Q96K37 410 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 NMES1Q9C002 83 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 TUBA4BQ9H853 241 aa6.73□□□□□ -1.33
HMGN1-201ENST00000288344 LOC102724200A0A096LPH7 203 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-201ENST00000288344 IGSF23A1L1A6 192 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 CFDP00746 253 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-201ENST00000288344 OR2F1Q13607 317 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 GSG1LQ6UXU4 331 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 CYP2G1PQ6ZSU1 146 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 Q6ZWC4 215 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 OR10P1Q8NGE3 313 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 SPATA25Q9BR10 227 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 GGTLC1Q9BX51 225 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 TMEM231Q9H6L2 316 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 RETNQ9HD89 108 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 LYRM2Q9NU23 88 aaPredicted RBP6.72□□□□□ -1.33
HMGN1-201ENST00000288344 RABAC1Q9UI14 185 aa6.72□□□□□ -1.33
HMGN1-201ENST00000288344 IGKV3-7A0A075B6H7 116 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 C5orf51A6NDU8 294 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 HELTA6NFD8 242 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 ZNF98A6NK75 572 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 SCGB2A1O75556 95 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 LYL1P12980 280 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 BMI1P35226 326 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 TFPI2P48307 235 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 AP2S1P53680 142 aaPredicted RBP6.71□□□□□ -1.34
HMGN1-201ENST00000288344 DEFB131AP59861 70 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 MGST2Q99735 147 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 GPN1Q9HCN4 374 aaPredicted RBP6.71□□□□□ -1.34
HMGN1-201ENST00000288344 OR5AC2Q9NZP5 309 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 WDR83OSQ9Y284 106 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 TP53TG1Q9Y2A0 90 aa6.71□□□□□ -1.34
HMGN1-201ENST00000288344 A8MTW9 85 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 FAM25EA8MYX2 175 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 UBE2CO00762 179 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 CST7O76096 145 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 PTTG1O95997 202 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 CXCL3P19876 107 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 SULT1A1P50225 295 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 DEFA1P59665 94 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 DEFA3P59666 94 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 RRAS2P62070 204 aaPredicted RBP6.7□□□□□ -1.34
HMGN1-201ENST00000288344 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 SIGLEC15Q6ZMC9 328 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 TRPT1Q86TN4 253 aaKnown RBP6.7□□□□□ -1.34
HMGN1-201ENST00000288344 CSNK1G2-AS1Q8NCQ2 148 aa6.7□□□□□ -1.34
HMGN1-201ENST00000288344 RNF183Q96D59 192 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms