RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HEATR5AQ86XA9 2040 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 OSTCQ9NRP0 149 aa15.13■□□□□ 0.01
PCDH1-201ENST00000287008 PPIFP30405 207 aaKnown RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 GATA4P43694 442 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 CDX1P47902 265 aaPredicted RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 SLC25A39Q9BZJ4 359 aaPredicted RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 FAM215AQ9Y5M1 114 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 SELENOKQ9Y6D0 94 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 TRAV5A0A0B4J249 113 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 C5orf24Q7Z6I8 188 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 RPLP1P05386 114 aaKnown RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 CR1LQ2VPA4 569 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 CFAP161Q6P656 301 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 Q6ZS49 121 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 RNF166Q96A37 237 aaPredicted RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 SCRT1Q9BWW7 348 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 NPIPB5A8MRT5 1133 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.12■□□□□ 0.01
PCDH1-201ENST00000287008 ASCL4Q6XD76 172 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 CCDC168Q8NDH2 2452 aa15.12■□□□□ 0.01
PCDH1-201ENST00000287008 DTX2Q86UW9 622 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 ATOH7Q8N100 152 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 HOXA5P20719 270 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 STAG3L3P0CL85 134 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 FABP2P12104 132 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 TMEM190Q8WZ59 177 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 IFI27P40305 119 aaPredicted RBP15.11■□□□□ 0.01
PCDH1-201ENST00000287008 MBD3L1Q8WWY6 194 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 FOXC2Q99958 501 aa15.11■□□□□ 0.01
PCDH1-201ENST00000287008 ITGB1BP1O14713 200 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 DNAL4O96015 105 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 PPBPP02775 128 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 QRFPP83859 136 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 VCX2Q9H322 139 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 FAM223BA6NKX1 122 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 CACNG7P62955 275 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 TMEM14EPQ6UXP3 125 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 FAM223AQ8IWN6 122 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 BEND2Q8NDZ0 799 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 BEX4Q9NWD9 120 aaPredicted RBP15.1■□□□□ 0.01
PCDH1-201ENST00000287008 ZNF562Q6V9R5 426 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 Q8TCH9 128 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 C1QTNF4Q9BXJ3 329 aa15.1■□□□□ 0.01
PCDH1-201ENST00000287008 PEF1Q9UBV8 284 aaKnown RBP15.1■□□□□ 0.01
PCDH1-201ENST00000287008 IGHV1-69DA0A0B4J2H0 117 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 IGHV1-69P01742 117 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 FHL1Q13642 323 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 NDPQ00604 133 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 CHCHD5Q9BSY4 110 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 CBY1Q9Y3M2 126 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 SRRM4A7MD48 611 aaKnown RBP15.09■□□□□ 0.01
PCDH1-201ENST00000287008 F2Z2F3 143 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 RUSC1-AS1Q66K80 236 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 ZNF581Q9P0T4 197 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 A0A087WWC5 75 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 IGKV1-16P04430 117 aa15.09■□□□□ 0.01
PCDH1-201ENST00000287008 RHPN1-AS1Q9BWJ2 59 aa15.08■□□□□ 0.01
PCDH1-201ENST00000287008 LINC00205P59089 165 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 COTL1Q14019 142 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 A0A087WX48 190 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 OVOL3O00110 214 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 OCC1Q8TAD7 63 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 SOD3P08294 240 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 Q6ZR03 302 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 SRSF8Q9BRL6 282 aaKnown RBP15.08■□□□□ 0
PCDH1-201ENST00000287008 WFDC1Q9HC57 220 aa15.08■□□□□ 0
PCDH1-201ENST00000287008 MALP21145 153 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 CRPP02741 224 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 LHFPL4Q7Z7J7 247 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 EXOC3-AS1Q8N2X6 119 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 IGKV2-40A0A087WW87 121 aaPredicted RBP15.07■□□□□ 0
PCDH1-201ENST00000287008 FCN3O75636 299 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 IGKV2D-40P01614 121 aaPredicted RBP15.07■□□□□ 0
PCDH1-201ENST00000287008 LMO1P25800 156 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 ZNF138P52744 262 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 DAZ1Q9NQZ3 744 aaKnown RBP15.07■□□□□ 0
PCDH1-201ENST00000287008 GAGE10A6NGK3 116 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 ACTL10Q5JWF8 245 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 CYSLTR1Q9Y271 337 aa15.07■□□□□ 0
PCDH1-201ENST00000287008 RPL35AP18077 110 aaKnown RBP15.06■□□□□ 0
PCDH1-201ENST00000287008 CNTFRP26992 372 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 PMCHL2Q9BQD1 86 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 MED13Q9UHV7 2174 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 SYNJ2BPP57105 145 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 TTC9CQ8N5M4 171 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 PGPEP1LA6NFU8 196 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 TCF23Q7RTU1 214 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 VSIRQ9H7M9 311 aa15.06■□□□□ 0
PCDH1-201ENST00000287008 SEPSECSQ9HD40 501 aaKnown RBP15.06■□□□□ 0
PCDH1-201ENST00000287008 NXT2Q9NPJ8 142 aaKnown RBP15.06■□□□□ 0
PCDH1-201ENST00000287008 IGHV2-70DA0A0C4DH43 119 aa15.05■□□□□ 0
PCDH1-201ENST00000287008 A8MXK9 166 aa15.05■□□□□ 0
PCDH1-201ENST00000287008 IGLV1-44P01699 117 aa15.05■□□□□ 0
PCDH1-201ENST00000287008 HS3ST6Q96QI5 342 aa15.05■□□□□ 0
PCDH1-201ENST00000287008 WT1P19544 449 aaPredicted RBP15.05■□□□□ 0
PCDH1-201ENST00000287008 ZNF415Q09FC8 603 aa15.05■□□□□ -0
PCDH1-201ENST00000287008 RCHY1Q96PM5 261 aa15.05■□□□□ -0
PCDH1-201ENST00000287008 SLX1AQ9BQ83 275 aa15.05■□□□□ -0
PCDH1-201ENST00000287008 OR9G4Q8NGQ1 327 aa15.05■□□□□ -0
PCDH1-201ENST00000287008 PRADC1Q9BSG0 188 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms