RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM106CPP0CH98 169 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 FAM106AQ4KMX7 169 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 OR1L4Q8NGR5 311 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 RAB37Q96AX2 223 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 CDX4O14627 284 aaPredicted RBP10.38□□□□□ -0.75
COL8A1-202ENST00000273342 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
COL8A1-202ENST00000273342 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 GAFA1Q96PS6 74 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 RNF7Q9UBF6 113 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
COL8A1-202ENST00000273342 PROCRQ9UNN8 238 aa10.38□□□□□ -0.75
COL8A1-202ENST00000273342 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 CD59P13987 128 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 MZT1Q08AG7 82 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 OR10X1Q8NGY0 326 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 ZNF71Q9NQZ8 489 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-202ENST00000273342 SPTBN1Q01082 2364 aaKnown RBP10.37□□□□□ -0.75
COL8A1-202ENST00000273342 C7orf71A4D174 169 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 APOHP02749 345 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-202ENST00000273342 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 C22orf34Q6ZV56 151 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 WFDC3Q8IUB2 231 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-202ENST00000273342 ZNF714Q96N38 554 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 Q9H3A6 140 aa10.37□□□□□ -0.75
COL8A1-202ENST00000273342 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 GPR183P32249 361 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 TM4SF20Q53R12 229 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 C12orf54Q6X4T0 127 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 WFDC8Q8IUA0 241 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 MEGF9Q9H1U4 602 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 SCRT2Q9NQ03 307 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 AKAP13Q12802 2813 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 LHBP01229 141 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 LYZP61626 148 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
COL8A1-202ENST00000273342 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 ANKRD11Q6UB99 2663 aaPredicted RBP10.36□□□□□ -0.75
COL8A1-202ENST00000273342 DSCAML1Q8TD84 2053 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.36□□□□□ -0.75
COL8A1-202ENST00000273342 SERTM2A0A1B0GWG4 89 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 ARMS2P0C7Q2 107 aa10.36□□□□□ -0.75
COL8A1-202ENST00000273342 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
COL8A1-202ENST00000273342 A0A1W2PPI3 338 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 FAM231BA6NCW3 169 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 FSTL3O95633 263 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 HLA-DRB1P01911 266 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 LIPFP07098 398 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 OR5AL1P0C617 328 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 RHOGP84095 191 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 LOXL1Q08397 574 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-202ENST00000273342 DEFB109BQ30KR1 87 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 DEFB124Q8NES8 71 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 PRSS3P2Q8NHM4 247 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 SLC25A15Q9Y619 301 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 TCRAP04437 139 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 BPIFA4PQ86YQ2 179 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 PERPQ96FX8 193 aa10.35□□□□□ -0.75
COL8A1-202ENST00000273342 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 IGHV1-46P01743 117 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 SP9P0CG40 484 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 CNTFRP26992 372 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 MLST8Q9BVC4 326 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 COL6A6A6NMZ7 2263 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-202ENST00000273342 CFHR2P36980 270 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
COL8A1-202ENST00000273342 S4R3C0 116 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 COL12A1Q99715 3063 aa10.34□□□□□ -0.75
COL8A1-202ENST00000273342 H3BUT2 72 aa10.33□□□□□ -0.75
COL8A1-202ENST00000273342 MYCNOSP40205 109 aa10.33□□□□□ -0.75
COL8A1-202ENST00000273342 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.75
COL8A1-202ENST00000273342 OSR1Q8TAX0 266 aaPredicted RBP10.33□□□□□ -0.75
COL8A1-202ENST00000273342 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.75
COL8A1-202ENST00000273342 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL8A1-202ENST00000273342 GUSBP1Q15486 140 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 NEU4Q8WWR8 484 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-202ENST00000273342 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 DKK4Q9UBT3 224 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 RAI1Q7Z5J4 1906 aaPredicted RBP10.33□□□□□ -0.76
COL8A1-202ENST00000273342 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 NHLH1Q02575 133 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 PRSS22Q9GZN4 317 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 RAB9BQ9NP90 201 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
COL8A1-202ENST00000273342 F11RQ9Y624 299 aaKnown RBP10.33□□□□□ -0.76
COL8A1-202ENST00000273342 IFI27P40305 119 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-202ENST00000273342 HIST1H1AQ02539 215 aaPredicted RBP10.32□□□□□ -0.76
COL8A1-202ENST00000273342 FAM27E3Q08E93 113 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms