RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DEFB112Q30KQ8 113 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 LINC00518Q8N0U6 118 aa11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 USP9XQ93008 2570 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 FAM110DQ8TAY7 271 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-201ENST00000265810 TRBV7-1A0A0A6YYK4 115 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 GPX1P07203 203 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 FABP4P15090 132 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 CTAG1AP78358 180 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 PGPEP1LA6NFU8 196 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 CD5P06127 495 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 CSN3P07498 182 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 CD81P60033 236 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
PDLIM2-201ENST00000265810 TGIF2-C20orf24A0A0A6YYL0 155 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 ZNF98A6NK75 572 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 CRISP2P16562 243 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 PMCHP20382 165 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 SPANXN1Q5VSR9 72 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 ZNF343Q6P1L6 599 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 SPSB3Q6PJ21 355 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 SDF2L1Q9HCN8 221 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 ABCA2Q9BZC7 2435 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 COX19Q49B96 90 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 SAPCD1Q5SSQ6 148 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 FA2HQ7L5A8 372 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 OTORQ9NRC9 128 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 EPDR1Q9UM22 224 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 ZNF253O75346 499 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 IGHV4-59P01825 116 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 NDPQ00604 133 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 ARHGAP32A7KAX9 2087 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 C20orf202A1L168 122 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 HIST2H2BCQ6DN03 193 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
PDLIM2-201ENST00000265810 SLC17A3O00476 420 aa11.52□□□□□ -0.56
PDLIM2-201ENST00000265810 FAM162BQ5T6X4 162 aa11.52□□□□□ -0.56
PDLIM2-201ENST00000265810 PRSS3P2Q8NHM4 247 aa11.52□□□□□ -0.56
PDLIM2-201ENST00000265810 A0A087X0M5 115 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 A0A1B0GX30 115 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 ISLRO14498 428 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 IGHV3OR16-12A0A075B7B8 117 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 PEMTQ9UBM1 199 aa11.52□□□□□ -0.57
PDLIM2-201ENST00000265810 HOXA3O43365 443 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 GPR82Q96P67 336 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 FAM223BA6NKX1 122 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 TRGC2P03986 189 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 FAM223AQ8IWN6 122 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 LINC00574Q9H8X3 128 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 TOMM40O96008 361 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 TAS2R60P59551 318 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 FNDC4Q9H6D8 234 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-201ENST00000265810 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 PRRC2AP48634 2157 aaKnown RBP11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 TWIST1Q15672 202 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 VCANP13611 3396 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 APCSP02743 223 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 PAX1P15863 534 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 FMC1Q96HJ9 113 aa11.5□□□□□ -0.57
PDLIM2-201ENST00000265810 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 LY6G5BQ8NDX9 201 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 GLMPQ8WWB7 406 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 BBC3Q96PG8 261 aaPredicted RBP11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 TXN2Q99757 166 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 EYSQ5T1H1 3165 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 OVOL3O00110 214 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 MEOX2P50222 304 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 BRWD1-AS2P59051 145 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 KRTDAPP60985 99 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 PEF1Q9UBV8 284 aaKnown RBP11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 PLXNB1O43157 2135 aa11.49□□□□□ -0.57
PDLIM2-201ENST00000265810 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 MGPP08493 103 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 YTHDF2Q9Y5A9 579 aaKnown RBP11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 GCGP01275 180 aa11.48□□□□□ -0.57
PDLIM2-201ENST00000265810 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms