RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SOX21Q9Y651 276 aaPredicted RBP8.78□□□□□ -1
MSH3-201ENST00000265081 TRBV19A0A075B6N1 114 aa8.77□□□□□ -1
MSH3-201ENST00000265081 TRAV30A0A087WSZ9 112 aa8.77□□□□□ -1
MSH3-201ENST00000265081 IGHV2-70DA0A0C4DH43 119 aa8.77□□□□□ -1
MSH3-201ENST00000265081 GOSR1O95249 250 aa8.77□□□□□ -1
MSH3-201ENST00000265081 CRISP2P16562 243 aa8.77□□□□□ -1
MSH3-201ENST00000265081 ARF6P62330 175 aa8.77□□□□□ -1
MSH3-201ENST00000265081 GNG5P63218 68 aa8.77□□□□□ -1
MSH3-201ENST00000265081 TEX43Q6ZNM6 134 aa8.77□□□□□ -1
MSH3-201ENST00000265081 Q6ZWC4 215 aa8.77□□□□□ -1
MSH3-201ENST00000265081 Q86TA4 180 aa8.77□□□□□ -1
MSH3-201ENST00000265081 Q8N976 141 aa8.77□□□□□ -1
MSH3-201ENST00000265081 NUP35Q8NFH5 326 aa8.77□□□□□ -1
MSH3-201ENST00000265081 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1
MSH3-201ENST00000265081 NAT8BQ9UHF3 227 aa8.77□□□□□ -1
MSH3-201ENST00000265081 RNF24Q9Y225 148 aa8.77□□□□□ -1
MSH3-201ENST00000265081 DDTP30046 118 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 MMDQ15546 238 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 IQCJQ1A5X6 159 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 FAM209BQ5JX69 171 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 LINC00322Q6ZN03 302 aaPredicted RBP8.77□□□□□ -1.01
MSH3-201ENST00000265081 REC114Q7Z4M0 266 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 GNB4Q9HAV0 340 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 APOHP02749 345 aaPredicted RBP8.77□□□□□ -1.01
MSH3-201ENST00000265081 NDPQ00604 133 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 SIGLEC15Q6ZMC9 328 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 TXN2Q99757 166 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 RASL11BQ9BPW5 248 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1.01
MSH3-201ENST00000265081 ITPR1Q14643 2758 aa8.77□□□□□ -1.01
MSH3-201ENST00000265081 SERF1AO75920 110 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 PDE6HQ13956 83 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 DMRTA1Q5VZB9 504 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 TRAV20A0A0B4J274 112 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 PGPA6NDG6 321 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 HLA-DRB1P01911 266 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 EFNA4P52798 201 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 ZNF705GA8MUZ8 300 aaPredicted RBP8.76□□□□□ -1.01
MSH3-201ENST00000265081 F2Z2F3 143 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 UBE2E1P51965 193 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 LMO4P61968 165 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 KCNS1Q96KK3 526 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 TBX15Q96SF7 602 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
MSH3-201ENST00000265081 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 TPPP2P59282 170 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 SLC25A5P05141 298 aaKnown RBP8.75□□□□□ -1.01
MSH3-201ENST00000265081 RD3LP0DJH9 198 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 C19orf54Q5BKX5 351 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 C1orf194Q5T5A4 169 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 OR4B1Q8NGF8 309 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
MSH3-201ENST00000265081 POLEQ07864 2286 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 GPX1P07203 203 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 CRIP2P52943 208 aaPredicted RBP8.75□□□□□ -1.01
MSH3-201ENST00000265081 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
MSH3-201ENST00000265081 UNQ6494/PRO21346Q6UXR6 183 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 Q8N9W7 124 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 SLAQ13239 276 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 NHLRC2Q8NBF2 726 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 GTSF1Q8WW33 167 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 RNF125Q96EQ8 232 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 C17orf77Q96MU5 243 aa8.75□□□□□ -1.01
MSH3-201ENST00000265081 ICE1Q9Y2F5 2266 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 IGHV7-81A0A0B4J1V7 117 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 MGST1P10620 155 aaKnown RBP8.74□□□□□ -1.01
MSH3-201ENST00000265081 C9orf152Q5JTZ5 239 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 NEU1Q99519 415 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 ZNF253O75346 499 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 ACACAQ13085 2346 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 A0A1W2PS18 150 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 CA1P00915 261 aaPredicted RBP8.74□□□□□ -1.01
MSH3-201ENST00000265081 APELAP0DMC3 54 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 MRPL52Q86TS9 123 aaKnown RBP8.74□□□□□ -1.01
MSH3-201ENST00000265081 VN1R17PQ8TDU5 208 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 HILPDAQ9Y5L2 63 aa8.74□□□□□ -1.01
MSH3-201ENST00000265081 VPS13CQ709C8 3753 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 UBE2G1P62253 170 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 IGHV3-21A0A0B4J1V1 117 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 APCSP02743 223 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 BRS3P32247 399 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 LYZP61626 148 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 LBHQ53QV2 105 aaPredicted RBP8.73□□□□□ -1.01
MSH3-201ENST00000265081 C18orf32Q8TCD1 76 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 RCHY1Q96PM5 261 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 NDUFAF3Q9BU61 184 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 SERTM2A0A1B0GWG4 89 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 BPIFA4PQ86YQ2 179 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 RNF114Q9Y508 228 aa8.73□□□□□ -1.01
MSH3-201ENST00000265081 HAX1O00165 279 aa8.72□□□□□ -1.01
MSH3-201ENST00000265081 RIF1Q5UIP0 2472 aaKnown RBP8.72□□□□□ -1.01
MSH3-201ENST00000265081 FAM110DQ8TAY7 271 aaPredicted RBP8.72□□□□□ -1.01
MSH3-201ENST00000265081 MS4A10Q96PG2 267 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms