RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TM2D1Q9BX74 207 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 ZNF660Q6AZW8 331 aaPredicted RBP13.7□□□□□ -0.22
USP13-201ENST00000263966 ZSWIM8A7E2V4 1837 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 PQLC2LA1A4F0 135 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 ANXA2RQ3ZCQ2 193 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 SP5Q6BEB4 398 aaPredicted RBP13.7□□□□□ -0.22
USP13-201ENST00000263966 PUSL1Q8N0Z8 303 aaKnown RBP13.7□□□□□ -0.22
USP13-201ENST00000263966 PLAC1Q9HBJ0 212 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 HLA-DQB1P01920 261 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 GATA2P23769 480 aaPredicted RBP13.7□□□□□ -0.22
USP13-201ENST00000263966 C17orf98A8MV24 154 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 ZNF138P52744 262 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 UBE2BP63146 152 aa13.7□□□□□ -0.22
USP13-201ENST00000263966 ZNF497Q6ZNH5 498 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 CENPVL1A0A0U1RR11 272 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 FCN3O75636 299 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 RCC1LQ96I51 464 aaKnown RBP13.69□□□□□ -0.22
USP13-201ENST00000263966 C9orf139Q6ZV77 190 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 PSG8Q9UQ74 426 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 MMP23AO75900 390 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 NPC2P61916 151 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 ATP5L2Q7Z4Y8 100 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 TMEM105Q8N8V8 129 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 ANAPC13Q9BS18 74 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 FXYD7P58549 80 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 TFF3Q07654 80 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 CT83Q5H943 113 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 TMEM256Q8N2U0 113 aa13.69□□□□□ -0.22
USP13-201ENST00000263966 C1QL2Q7Z5L3 287 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 CHCHD1Q96BP2 118 aaKnown RBP13.68□□□□□ -0.22
USP13-201ENST00000263966 C14orf144Q96I85 54 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 EPOPA6NHQ4 379 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 DDTP30046 118 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 Q96MF0 132 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 LDLRAD4O15165 306 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 APCDD1LQ8NCL9 501 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 RNF5Q99942 180 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
USP13-201ENST00000263966 DERL1Q9BUN8 251 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 OBSL1O75147 1896 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 TRBV5-7A0A0A0MS05 114 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 SIGLEC5O15389 551 aa13.68□□□□□ -0.22
USP13-201ENST00000263966 SLAQ13239 276 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 DMRTA1Q5VZB9 504 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 MIR17HGQ75NE6 70 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 VWC2Q2TAL6 325 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 DSCR8Q96T75 97 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 WDR90Q96KV7 1748 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 ESDP10768 282 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
USP13-201ENST00000263966 MIXL1Q9H2W2 232 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 A0A1B0GV90 55 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 GTF3AQ92664 365 aaKnown RBP13.67□□□□□ -0.22
USP13-201ENST00000263966 CTAG1AP78358 180 aa13.67□□□□□ -0.22
USP13-201ENST00000263966 PRB3Q04118 309 aaPredicted RBP13.66□□□□□ -0.22
USP13-201ENST00000263966 DSCAML1Q8TD84 2053 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 NPIPB5A8MRT5 1133 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 IRF3Q14653 427 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 TMEM155Q4W5P6 130 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 EML5Q05BV3 1969 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 LINC01619G3V211 115 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 TPTE2P1Q5T6R2 138 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 SLC17A3O00476 420 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 CD160O95971 181 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 C21orf62-AS1Q17RA5 79 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 RFLNBQ8N5W9 214 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 PRDM13Q9H4Q3 707 aa13.66□□□□□ -0.22
USP13-201ENST00000263966 SNAI2O43623 268 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 CTSBP07858 339 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 NEUROG3Q9Y4Z2 214 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 A0A0G2JMM0 328 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 A0A1W2PPB8 328 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 A0A1W2PRS3 328 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 KIR3DP1A8MWS1 328 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 RNF223E7ERA6 249 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 CLDN16Q9Y5I7 305 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 IGHV1-18A0A0C4DH31 117 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 TMEM158Q8WZ71 300 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 A0A1W2PR77 199 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 RHODO00212 210 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 CD300EQ496F6 205 aaPredicted RBP13.65□□□□□ -0.22
USP13-201ENST00000263966 MSMBP08118 114 aa13.65□□□□□ -0.22
USP13-201ENST00000263966 RPL15P61313 204 aaKnown RBP13.65□□□□□ -0.22
USP13-201ENST00000263966 CCL20P78556 96 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 J3QLI3 93 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 SMIM10L1P0DMW3 83 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 SMIM10Q96HG1 83 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 LYNX1G3V0Z9 82 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 LYNX1P0DP58 116 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 SPRR3Q9UBC9 169 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 PRSS23O95084 383 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 CTHRC1Q96CG8 243 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 PLXNA2O75051 1894 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
USP13-201ENST00000263966 TRAV13-1A0A0B4J241 112 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms