RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 RPL15P61313 204 aaKnown RBP6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 GCSAMLQ5JQS6 135 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 TMEM158Q8WZ71 300 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 HIST1H2BAQ96A08 127 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 PARD6GQ9BYG4 376 aaPredicted RBP6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 TMPRSS5Q9H3S3 457 aa6.53□□□□□ -1.36
GTF3C3-201ENST00000263956 FLNBO75369 2602 aaKnown RBP6.52□□□□□ -1.36
GTF3C3-201ENST00000263956 ABCA2Q9BZC7 2435 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 NDUFA4O00483 81 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 AVPP01185 164 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 RPLP1P05386 114 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 GTSCR1Q86UQ5 136 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 OVOL1O14753 267 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 RPS10P46783 165 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 IL15RAQ13261 267 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 GPX1P07203 203 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 NDPQ00604 133 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 SAPCD1Q5SSQ6 148 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 TOMM20LQ6UXN7 152 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 OTORQ9NRC9 128 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 AKAP13Q12802 2813 aa6.52□□□□□ -1.37
GTF3C3-201ENST00000263956 REV3LO60673 3130 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM218A2RU14 115 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 PYYP10082 97 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 RAB5BP61020 215 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 OR10G8Q8NGN5 311 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 MCRIP2Q9BUT9 160 aaKnown RBP6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 Q9H3A6 140 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 C1orf229Q6ZS94 237 aaPredicted RBP6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 ARHGAP32A7KAX9 2087 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 TRAV5A0A0B4J249 113 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 SERTM2A0A1B0GWG4 89 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 LINC00862A6NCI5 91 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 CYB561D1Q8N8Q1 229 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 SMR3AQ99954 134 aa6.51□□□□□ -1.37
GTF3C3-201ENST00000263956 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 CRYGCP07315 174 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 STHQ8IWL8 128 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 A0A1W2PRE2 83 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 FBLL1A6NHQ2 334 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 PMS2P5A8MQ11 134 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 TEX22C9J3V5 150 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 INS-IGF2F8WCM5 200 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 CCL24O00175 119 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 IGLC1P0CG04 106 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 STAG3L2P0CL84 134 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 STAG3L3P0CL85 134 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 FNDC4Q9H6D8 234 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM250H0YL14 139 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 CLDN34H7C241 214 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 MFAP2P55001 183 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 BRWD1-AS2P59051 145 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 BTN1A1Q13410 526 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 EIF4EBP1Q13541 118 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 MBD3L1Q8WWY6 194 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 SHANK2-AS3Q9BTD1 123 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 C9orf139Q6ZV77 190 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 OR2D3Q8NGH3 330 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 CTDSP1Q9GZU7 261 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 VSIRQ9H7M9 311 aa6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 SEPSECSQ9HD40 501 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-201ENST00000263956 A0A1W2PPQ1 181 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 SEC14L6B5MCN3 397 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 PEX7O00628 323 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 HILS1P60008 231 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 PAX2Q02962 417 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 PSMG4Q5JS54 123 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 ZNF506Q5JVG8 444 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 ZFP82Q8N141 532 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 RPP25LQ8N5L8 163 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM190Q8WZ59 177 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 MRPL27Q9P0M9 148 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 TMSB15BA0A087X1C1 80 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 H3BQ15 152 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 AKR1D1P51857 326 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 TCTEX1D4Q5JR98 221 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 C1orf194Q5T5A4 169 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 SPATA31B1PQ5VZV4 182 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 SELENOKQ9Y6D0 94 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 TMEM189A5PLL7 270 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 K7EIM0 57 aa6.49□□□□□ -1.37
GTF3C3-201ENST00000263956 USF2Q15853 346 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms