RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 LINC00476Q8WZB0 136 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 CLEC5AQ9NY25 188 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 SLC45A2Q9UMX9 530 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 SOCS3O14543 225 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 SSSCA1O60232 199 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
USE1-201ENST00000263897 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 MIFP14174 115 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 AKR1C1Q04828 323 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
USE1-201ENST00000263897 IAH1Q2TAA2 248 aaPredicted RBP11.66□□□□□ -0.54
USE1-201ENST00000263897 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
USE1-201ENST00000263897 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 C1QTNF4Q9BXJ3 329 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 X6R8D5 127 aa11.66□□□□□ -0.54
USE1-201ENST00000263897 IGHV4-28A0A0C4DH34 117 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 ZNF98A6NK75 572 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 LY6G6CO95867 125 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 TCRBP04435 133 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 ORM2P19652 201 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 PSMB3P49720 205 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 TMEM14EPQ6UXP3 125 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 TBC1D24Q9ULP9 559 aa11.65□□□□□ -0.54
USE1-201ENST00000263897 SMCO3A2RU48 225 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 ISLRO14498 428 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 CCNKO75909 580 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 TAS2R30P59541 319 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 DEFB1P60022 68 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 DLK1P80370 383 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 GSG1LQ6UXU4 331 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 SAV1Q9H4B6 383 aaPredicted RBP11.64□□□□□ -0.55
USE1-201ENST00000263897 SLC25A22Q9H936 323 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
USE1-201ENST00000263897 TSC22D2O75157 780 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 IL5P05113 134 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 METTL15P1P0C7V9 234 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 S100A7P31151 101 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 GALR1P47211 349 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 MEOX2P50222 304 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 FOXI2Q6ZQN5 318 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 LINC00299Q6ZSB3 139 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 CYP2G1PQ6ZSU1 146 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 OR10P1Q8NGE3 313 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 CCDC32Q9BV29 185 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 TMEM147Q9BVK8 224 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 SLC25A32Q9H2D1 315 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
USE1-201ENST00000263897 TRAV6A0A075B6T7 132 aa11.62□□□□□ -0.55
USE1-201ENST00000263897 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
USE1-201ENST00000263897 FNDC10F2Z333 226 aa11.62□□□□□ -0.55
USE1-201ENST00000263897 MBPP02686 304 aaPredicted RBP11.62□□□□□ -0.55
USE1-201ENST00000263897 RRAS2P62070 204 aaPredicted RBP11.62□□□□□ -0.55
USE1-201ENST00000263897 SELENOTP62341 195 aa11.62□□□□□ -0.55
USE1-201ENST00000263897 SPATA31B1PQ5VZV4 182 aa11.62□□□□□ -0.55
USE1-201ENST00000263897 GPR82Q96P67 336 aa11.62□□□□□ -0.55
USE1-201ENST00000263897 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
USE1-201ENST00000263897 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 PLP1P60201 277 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 ZNF846Q147U1 533 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 ZNF431Q8TF32 576 aaPredicted RBP11.61□□□□□ -0.55
USE1-201ENST00000263897 C16orf92Q96LL3 132 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 RPRMQ9NS64 109 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 NUDT15Q9NV35 164 aa11.61□□□□□ -0.55
USE1-201ENST00000263897 PLECQ15149 4684 aaKnown RBP11.61□□□□□ -0.55
USE1-201ENST00000263897 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 CCSO14618 274 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 HYPMO75409 117 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 HLA-DMBP28068 263 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 RAP2BP61225 183 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 C12orf45Q8N5I9 185 aaPredicted RBP11.6□□□□□ -0.55
USE1-201ENST00000263897 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 C2CD4CQ8TF44 421 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 C20orf173Q96LM9 149 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 SEC22CQ9BRL7 303 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 SLC25A39Q9BZJ4 359 aaPredicted RBP11.6□□□□□ -0.55
USE1-201ENST00000263897 DOK5Q9P104 306 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 MGAT4CQ9UBM8 478 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
USE1-201ENST00000263897 A0A0J9YX75 114 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 F6UB75 175 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 H3BRN7 92 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 K7EPK0 472 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 DEDDO75618 318 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms