RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 TM4SF20Q53R12 229 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 NIT1Q86X76 327 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 STXBP6Q8NFX7 210 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 RAB37Q96AX2 223 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 FNDC4Q9H6D8 234 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM186Q96B77 213 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 DKK4Q9UBT3 224 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 CBY1Q9Y3M2 126 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM136Q6ZRR5 245 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 SLC25A48Q6ZT89 311 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 NAA38Q9BRA0 125 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 A0A1W2PPI3 338 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 M0R3E3 92 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 GPR82Q96P67 336 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM70Q9BUB7 260 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 C2CD3Q4AC94 2353 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 P0C879 139 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 MC5RP33032 325 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 CA7P43166 264 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
PDZRN3-201ENST00000263666 DLEU1O43261 78 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PCP4P48539 62 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 NMUP48645 174 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF738Q8NE65 137 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 FAM215AQ9Y5M1 114 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 YPEL3P61236 119 aaPredicted RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 CACNG8Q8WXS5 425 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 F11RQ9Y624 299 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 SORL1Q92673 2214 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PRR20EP86478 221 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PRR20CP86479 221 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PRR20DP86480 221 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PRR20BP86481 221 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PRR20AP86496 221 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 ADIPOQQ15848 244 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 COA6Q5JTJ3 125 aaKnown RBP13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 TP73-AS1Q9UF72 201 aa13.09□□□□□ -0.31
PDZRN3-201ENST00000263666 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 S100A7P31151 101 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 FAM90A9PA6NNJ1 464 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 PSG1P11464 419 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 C18orf32Q8TCD1 76 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 RITA1Q96K30 269 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 VKORC1Q9BQB6 163 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 TM4SF5O14894 197 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 IGLV1-44P01699 117 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 TPTE2P1Q5T6R2 138 aa13.08□□□□□ -0.32
PDZRN3-201ENST00000263666 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 CLEC3BP05452 202 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 SCGB2A2Q13296 93 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 Q9UFV3 132 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 A1L4Q6 167 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 MBD3L4A6NDZ8 208 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 MBD3L3A6NE82 208 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 MBD3L5A6NJ08 208 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 SEM1Q6ZVN7 128 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 MBD3L2Q8NHZ7 208 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
PDZRN3-201ENST00000263666 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 PRSS1P07477 247 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 RIGQ13278 110 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 SLC25A2Q9BXI2 301 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 TWIST1Q15672 202 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 RNASE6Q93091 150 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 TLN2Q9Y4G6 2542 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 KLRD1Q13241 179 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 PPP1R27Q86WC6 154 aa13.06□□□□□ -0.32
PDZRN3-201ENST00000263666 IGFL3Q6UXB1 125 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 DMDP11532 3685 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 SLC25A34Q6PIV7 304 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 STPG4Q8N801 248 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 AP5S1Q9NUS5 200 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 RNF114Q9Y508 228 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
PDZRN3-201ENST00000263666 LGALS7P47929 136 aa13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 TMEM178BH3BS89 294 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms