RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ARL14EPLP0DKL9 152 aa17.45■□□□□ 0.38
UFD1-201ENST00000263202 C8orf88P0DMB2 117 aa17.45■□□□□ 0.38
UFD1-201ENST00000263202 SLC25A39Q9BZJ4 359 aaPredicted RBP17.45■□□□□ 0.38
UFD1-201ENST00000263202 CLPSL1A2RUU4 121 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 GGCTO75223 188 aaKnown RBP17.44■□□□□ 0.38
UFD1-201ENST00000263202 CXorf1O96002 111 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 CDX1P47902 265 aaPredicted RBP17.44■□□□□ 0.38
UFD1-201ENST00000263202 FAM167A-AS1Q96KT0 104 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 SLC25A2Q9BXI2 301 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 TMPRSS5Q9H3S3 457 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 IGHV3OR16-8A0A075B7F1 116 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 PROK1P58294 105 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 TAS2R45P59539 299 aa17.44■□□□□ 0.38
UFD1-201ENST00000263202 I3L521 148 aa17.43■□□□□ 0.38
UFD1-201ENST00000263202 HAX1O00165 279 aa17.43■□□□□ 0.38
UFD1-201ENST00000263202 KHDC3LQ587J8 217 aa17.43■□□□□ 0.38
UFD1-201ENST00000263202 C18orf65Q6ZTR6 163 aa17.43■□□□□ 0.38
UFD1-201ENST00000263202 ZNF503Q96F45 646 aa17.43■□□□□ 0.38
UFD1-201ENST00000263202 RAB19A4D1S5 217 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 H3BRN7 92 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 NDUFA4O00483 81 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 FAM210AQ96ND0 272 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 SHANK2-AS3Q9BTD1 123 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 SCRT1Q9BWW7 348 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 RABAC1Q9UI14 185 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 CD28P10747 220 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 PQLC2Q6ZP29 291 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 IQCF2Q8IXL9 164 aa17.42■□□□□ 0.38
UFD1-201ENST00000263202 OR7C2O60412 319 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 GCHFRP30047 84 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 KHDC1LQ5JSQ8 128 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 LEMD1Q68G75 181 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 HIST2H2BDQ6DRA6 164 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 EIF4E3Q8N5X7 224 aaKnown RBP17.41■□□□□ 0.38
UFD1-201ENST00000263202 C4orf3Q8WVX3 66 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 GNG13Q9P2W3 67 aa17.41■□□□□ 0.38
UFD1-201ENST00000263202 PSMB3P49720 205 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 PMS2P11Q13670 270 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 UNQ9165/PRO28630Q6UXU0 137 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 WFDC12Q8WWY7 111 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 SRSF3P84103 164 aaKnown RBP17.4■□□□□ 0.38
UFD1-201ENST00000263202 S100A7AQ86SG5 101 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 C11orf44Q8N8P7 122 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 CITED4Q96RK1 184 aa17.4■□□□□ 0.38
UFD1-201ENST00000263202 IGHV4OR15-8A0A075B7B6 117 aa17.39■□□□□ 0.37
UFD1-201ENST00000263202 A0A087WW49 117 aa17.39■□□□□ 0.37
UFD1-201ENST00000263202 ZNF98A6NK75 572 aa17.39■□□□□ 0.37
UFD1-201ENST00000263202 HSPB1P04792 205 aaKnown RBP17.39■□□□□ 0.37
UFD1-201ENST00000263202 GUK1Q16774 197 aa17.39■□□□□ 0.37
UFD1-201ENST00000263202 C20orf24Q9BUV8 137 aa17.39■□□□□ 0.37
UFD1-201ENST00000263202 RBFOX3A6NFN3 312 aa17.38■□□□□ 0.37
UFD1-201ENST00000263202 HAGHQ16775 308 aa17.38■□□□□ 0.37
UFD1-201ENST00000263202 TOR2AQ5JU69 321 aa17.38■□□□□ 0.37
UFD1-201ENST00000263202 GPHB5Q86YW7 130 aa17.38■□□□□ 0.37
UFD1-201ENST00000263202 OR51M1Q9H341 326 aa17.38■□□□□ 0.37
UFD1-201ENST00000263202 OR10J4P0C629 311 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 PYYP10082 97 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 RPEL1Q2QD12 228 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.37■□□□□ 0.37
UFD1-201ENST00000263202 KLHL30-AS1Q8NEE0 82 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 TMEM190Q8WZ59 177 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 CITED2Q99967 270 aaPredicted RBP17.37■□□□□ 0.37
UFD1-201ENST00000263202 RARRES2Q99969 163 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 PAXXQ9BUH6 204 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 EIF5A2Q9GZV4 153 aaKnown RBP17.37■□□□□ 0.37
UFD1-201ENST00000263202 ZNF207O43670 478 aaKnown RBP17.37■□□□□ 0.37
UFD1-201ENST00000263202 STXBP6Q8NFX7 210 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 SUN5Q8TC36 379 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 METTL26Q96S19 204 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 TMEM231Q9H6L2 316 aa17.37■□□□□ 0.37
UFD1-201ENST00000263202 A0A1B0GUS0 222 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 IFNA1P01562 189 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 GP9P14770 177 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 CRYBB3P26998 211 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 DEFB136Q30KP8 78 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 FAM106AQ4KMX7 169 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 MANBALQ9NQG1 85 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 TMEM167BQ9NRX6 74 aa17.36■□□□□ 0.37
UFD1-201ENST00000263202 TSSC4Q9Y5U2 329 aaPredicted RBP17.36■□□□□ 0.37
UFD1-201ENST00000263202 LOC102723971A0A1B0GUV8 181 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 ZNF320A2RRD8 509 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 CD5P06127 495 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 BCL2P10415 239 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 NPPCP23582 126 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 S100A7P31151 101 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 PPT1P50897 306 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 UQCC3Q6UW78 93 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 FXYD5Q96DB9 178 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 TMEM14CQ9P0S9 112 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 U3KQE9 123 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 C2CD3Q4AC94 2353 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 ATP6V1G1O75348 118 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 UBE2L3P68036 154 aaKnown RBP17.35■□□□□ 0.37
UFD1-201ENST00000263202 ZNF506Q5JVG8 444 aa17.35■□□□□ 0.37
UFD1-201ENST00000263202 BUB3O43684 328 aa17.34■□□□□ 0.37
UFD1-201ENST00000263202 PAGE4O60829 102 aa17.34■□□□□ 0.37
UFD1-201ENST00000263202 APOHP02749 345 aaPredicted RBP17.34■□□□□ 0.37
UFD1-201ENST00000263202 HOXD3P31249 432 aaPredicted RBP17.34■□□□□ 0.37
UFD1-201ENST00000263202 KRTAP10-3P60369 221 aa17.34■□□□□ 0.37
UFD1-201ENST00000263202 ICAM4Q14773 271 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms