RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 IGFBPL1Q8WX77 278 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 TICRRQ7Z2Z1 1910 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 SRRM5B3KS81 715 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 NCR2O95944 276 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 B3GALT5-AS1P59052 145 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 MLANAQ16655 118 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 TMEM249Q2WGJ8 235 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 GAS1P54826 345 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 NHP2Q9NX24 153 aaKnown RBP9.97□□□□□ -0.81
SPG11-201ENST00000261866 IGKV1D-17A0A075B6S4 117 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 IFITM2Q01629 132 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 EFNB3Q15768 340 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 DUX4L9Q6RFH8 374 aaPredicted RBP9.97□□□□□ -0.81
SPG11-201ENST00000261866 PRSS33Q8NF86 280 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 JPT2Q9H910 190 aa9.97□□□□□ -0.81
SPG11-201ENST00000261866 J3QKU1 62 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 CCL1P22362 96 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 NACAE9PAV3 2078 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 HGFACQ04756 655 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 CIARTQ8N365 385 aaPredicted RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 MEGF9Q9H1U4 602 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 MED12Q93074 2177 aa9.96□□□□□ -0.81
SPG11-201ENST00000261866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 C17orf82Q86X59 251 aaPredicted RBP9.96□□□□□ -0.81
SPG11-201ENST00000261866 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.82
SPG11-201ENST00000261866 RNF126Q9BV68 326 aa9.96□□□□□ -0.82
SPG11-201ENST00000261866 PAX4O43316 350 aa9.96□□□□□ -0.82
SPG11-201ENST00000261866 IFI27P40305 119 aaPredicted RBP9.96□□□□□ -0.82
SPG11-201ENST00000261866 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
SPG11-201ENST00000261866 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
SPG11-201ENST00000261866 RNF222A6NCQ9 220 aa9.96□□□□□ -0.82
SPG11-201ENST00000261866 ADMP35318 185 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 H3BUT2 72 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 ERCC8Q13216 396 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 KIF26BQ2KJY2 2108 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 A0A096LPF7 62 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 CCL20P78556 96 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
SPG11-201ENST00000261866 LINC00473A8K010 186 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 H0YJW9 148 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 LHBP01229 141 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 HS3ST6Q96QI5 342 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 TMEM8BA6NDV4 472 aa9.95□□□□□ -0.82
SPG11-201ENST00000261866 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 FOXL1Q12952 345 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 RNF182Q8N6D2 247 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 DYSFO75923 2080 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 TEX38Q6PEX7 206 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 WISP1O95388 367 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 SLC25A2Q9BXI2 301 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 PHF3Q92576 2039 aaKnown RBP9.94□□□□□ -0.82
SPG11-201ENST00000261866 A6NNC1 897 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 OVOL3O00110 214 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 NAPSAO96009 420 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
SPG11-201ENST00000261866 SLC25A48Q6ZT89 311 aaKnown RBP9.94□□□□□ -0.82
SPG11-201ENST00000261866 OR2K2Q8NGT1 345 aa9.94□□□□□ -0.82
SPG11-201ENST00000261866 BTCP35070 178 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 DMRT1Q9Y5R6 373 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 EP300Q09472 2414 aaPredicted RBP9.93□□□□□ -0.82
SPG11-201ENST00000261866 DOCK8Q8NF50 2099 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 A0A087WWL8 130 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 IGHV3-16A0A0C4DH30 117 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 TCRAP04437 139 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 MSMBP08118 114 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 COL6A6A6NMZ7 2263 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 J3QRE1 110 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 PRTN3P24158 256 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 C5orf64Q2M2E5 130 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
SPG11-201ENST00000261866 DDTP30046 118 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.92□□□□□ -0.823e-6■■■■□ 25.4
SPG11-201ENST00000261866 CHTOPQ9Y3Y2 248 aaKnown RBP9.92□□□□□ -0.82
SPG11-201ENST00000261866 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 H0YIZ8 118 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 PRB2P02812 416 aaPredicted RBP9.92□□□□□ -0.82
SPG11-201ENST00000261866 IGKV1-16P04430 117 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 OCC1Q8TAD7 63 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 KNCNA6PVL3 124 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.92□□□□□ -0.82
SPG11-201ENST00000261866 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 K7EM74 188 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
SPG11-201ENST00000261866 U3KQA8 63 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms